NONHSAT091387
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091387 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
554 nt |
Genomic location |
chr3-:119171356..119182461 |
Exon number |
4 |
Exons |
119171356..119171377,119176865..119176930,119180809..119180995,119182183..119182461 |
Genome context |
|
Sequence |
000001 AGCTCCGCGG TAATGGAGGC TAGGGATGGG TGCTGAAGTA TCAGGCTCTG GCTCTAGCTT TAGCTCTGGC ACTGGAACTG 000080
000081 CGTCGGAGTC TGGGTCTGAG TCTGGCAGCC CGAAGCCTGG ACACCTTTTC TTGATTCTCT AGGCGGGGGC TGCCTGCGTC 000160 000161 CAAGCAGCTG GTTTGCAGCG TTCCAACGCT GGGAGGGAGT TCCCTTACCT GGGGTCCAGT CTGTAAAGTT GTCGCCGCTT 000240 000241 TCTAGGGACC CCGCCCCACC GGCTGGGACT CTTCCATGCA GTTGAAACTG GTTGACAACC ATTAACCTGG GTTGCAACTA 000320 000321 CAGGTGGCAC TGGAAGCAGA CTGGTTCCTG GACATGCCCG GTGGAAGGAG GGGCCCTAGT CGGCAACAGC TAAGCCGTTC 000400 000401 AGCTTTACCT TCTTTGCAGA CTTTGGTTGG TGGAGGCTGT GGCAATGGAA CAGGCTTGAG AAACAGTACA TCAACATTTA 000480 000481 TAAAACAGTG TGGTGGTATC CTTACAATCA TCCTGCTTCT TGTACATCAC TGAATTTTCA TCTCATTGAT TATC |
Predicted Small Protein
Name | NONHSAT091387_smProtein_353:532 |
Length | 60 |
Molecular weight | 6114.0542 |
Aromaticity | 0.0169491525424 |
Instability index | 75.2610169492 |
Isoelectric point | 11.8302612305 |
Runs | 9 |
Runs residual | 0.0080858342404 |
Runs probability | 0.0472335080177 |
Amino acid sequence | MPGGRRGPSRQQLSRSALPSLQTLVGGGCGNGTGLRNSTSTFIKQCGGILTIILLLVHH |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLEELLHHHHHHHLLLLEEEEEEEELL |
PRMN | - |
PiMo | - |