NONHSAT091410
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091410 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
845 nt |
Genomic location |
chr3+:119469320..119484433 |
Exon number |
3 |
Exons |
119469320..119469467,119469784..119469945,119483899..119484433 |
Genome context |
|
Sequence |
000001 GTCCCTTCCA CATTAAGAAC TAAGGCTCAA AGAGAAGTAT AAGACTAGGT CTTTATATTT GTAAGTTACT TACACTCTAG 000080
000081 ATATCAAACG AAATGTAACT CACATGAAGT GCTTCAATGC TGAATAGGTT GGTACAAACT CAAGTGCGTG AGGAACGCAC 000160 000161 AGCGGAAACA TATTCTTGCA GCCCATCAGA TCATCCACAG TTACACGGAA AGCATGGTTC AAAAGAAATT AACTGAGGGA 000240 000241 GAGCAAGATG AGGCCTCAAA TGCTGCCATG TTACTTGAGA AAGAAACTCA AAATGAGAAC AACAGCTAAG attgtgattt 000320 000321 ttttgtaaaa gaagctgtac gaatcatcat aaataattcc aatagtctgc acttctcCCA AGGTGTGCAC TGCTCATAAA 000400 000401 CTTGCCAGTG TGTGATTCAT GAGAAAGGAG ATTTATTTTC CTTAAACATC CAATAATTTA AAATGATTTT CAATAATAAT 000480 000481 AATCAAATGA AAAAGCTTCA TTCTCTTCAG TGTCTTCTAG ATGCCCTACT TAAAGAGAAC ATTTTCTTAT GTCTCATTTC 000560 000561 AATATTTTGT TAACTATGAG GATGTGCTGG TTTGTTGAAT CAAACAAAAG GAAATGTTGT GGAATATTTT TCCAAGTAGT 000640 000641 TTTGGTTCAC TATTCACAGG ACAttggcat tatctactaa ggctgaaaat gtgcatattc catgactcag gattttatct 000720 000721 cctagatata tattcaacag aaatgcatga gtatgtgcac caacaggcat gacaaaaata tttatagtag tggtgttcac 000800 000801 aatagtccca aactggaaac ccaagtgtcc atctccatcg gaaca |
Predicted Small Protein
Name | NONHSAT091410_smProtein_548:679 |
Length | 44 |
Molecular weight | 5172.1663 |
Aromaticity | 0.162790697674 |
Instability index | 67.0674418605 |
Isoelectric point | 8.61163330078 |
Runs | 6 |
Runs residual | 0.0177684870656 |
Runs probability | 0.0487399163871 |
Amino acid sequence | MSHFNILLTMRMCWFVESNKRKCCGIFFQVVLVHYSQDIGIIY |
Secondary structure | LLHHHHHHHHHHHHHHHLLLLLEEEEEEEEEEEEEELLEEEEE |
PRMN | - |
PiMo | - |