NONHSAT091414
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT091414 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
665 nt |
Genomic location |
chr3-:119562110..119634981 |
Exon number |
6 |
Exons |
119562110..119562200,119582267..119582452,119595261..119595355,119624603..119624699,119631552..119631657,119634892..119634981 |
Genome context |
|
Sequence |
000001 ATTCCTTTGG AATCTGCCAT CGGGATATTA AACCGCAGAA CCTCTTGTTG GATCCTGATA CTGCTGTATT AAAACTCTGT 000080
000081 GACTTTGGAA TGCAAAGCAG CTGGTCCGAG GAGAACCCAA TGTTTCGTAT ATCTGTTCTC GGTACTATAG GGCACCAGAG 000160 000161 TTGATCTTTG GAGCCACTGA TTATACCTCT AGTATAATGT ATGGTCTGCT GGCTGTGTGT TGGCTGAGCT GTTACTAGGA 000240 000241 CAACCAATAT TTCCAGGGGA TAGTGGTGTG GATCAGTTGG TAGAAATAAT CAAGTCCTGG GAACTCCAAC AAGGGAGCAA 000320 000321 ATCAGAGAAA TGAACCCAAA CTACACAGAA TTTAAATTCC CTCAAATTAA GGCACATCCT TGGACTAAGT CTTCCGACCC 000400 000401 CGAACTCCAC CGGAGGCAAT TGCACTGTGT AGCCGTCTGC TGGAGTATAC ACCAACTGCC CGACTAACAC CACTGGAAGC 000480 000481 TTGTGCACAT TCATTTTTTG ATGAATTACG GGACCCAAAT GTCAAACTAC CAAATGGGCG AGACACACCT GCACTCTTCA 000560 000561 ACTTCACCAC TCAAAACTGT CAAGTAATCC ACCTCTGGCT ACCATCCTTA TTCCTCCTCA TGCTCGGATT CAAGCAGCTG 000640 000641 CTTCAACCCC CACAAATGCC ACAGC |
Predicted Small Protein
Name | NONHSAT091414_smProtein_329:466 |
Length | 46 |
Molecular weight | 5387.1003 |
Aromaticity | 0.111111111111 |
Instability index | 42.4422222222 |
Isoelectric point | 7.87506103516 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0406288641583 |
Amino acid sequence | MNPNYTEFKFPQIKAHPWTKSSDPELHRRQLHCVAVCWSIHQLPD |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLHHHHHLLEEEEEEEEELEELLL |
PRMN | - |
PiMo | - |