NONHSAT091480

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT091480

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1943 nt

Genomic location

chr3+:121468132..121470030

Exon number

1

Exons

121468132..121470030

Genome context

Sequence
000001 CCGCTCCAGG AACAAGGCCG TGCGGACAGG ACTGACCTAG GCGCTTTTCC CCGTCGCTCC CAGAGGAGAA ACGTACCGGG 000080
000081 GAGGGGACAG ACCGTGAGCA AGTGGTCCAA GTCTGCGCAG GGTGACCCCG AAGGCCCACC GGAGAGGCCG AGGCTTGTGG 000160
000161 GCTACTAGAA CTAGGCCTGG TAGGTGAAGG AGGCGGGTGA AGGGCCGGAT CCAGGACTGA ATCCGGGAGA GGCGGGGCGA 000240
000241 GGAGGGGACT CCGGTGTAGC TGCTTGGGCA GCTCCCGCGG CCCCTCTGGC GGGGGTGACC GTTATTGGAC TCGCAGAGGG 000320
000321 AAGAGTTGGG TAGCGTCCCC TACTCACCTA GAAGCGCTGC CGCCTGAGGC TCCAGCTGCC CCCCTCCCAA TTCAAGCCAC 000400
000401 GTCAGCTCGG GAAGCCCGTA CGCGACACCT TCCACCGCCG CGCCCCGCCA GGGACTCAGC CACTAGCAGT TGGGACGGAA 000480
000481 GATGGGATTA AGACACCGAC CAATCAGGAC TATCGGCAGG ACGTTACCAG GGAGACCAGG CACACCTTGT TTGTTACCAA 000560
000561 CCTATCAACA ATGACGGAAA CCAATCAACG ACAGAAGATG CTCCGCTTCC TCAAAGAAAC AGCCAATGGA CCCTAAAGAG 000640
000641 TGAATGAGGG GAGTGATTAG ACCCGAGTAG GTGCCCCGGA ACAAGATCTG GGGAGGGACA GGAAGTGTCG AGTGGGCGGG 000720
000721 CGTTCTGGGA AAGGTCAGAT GTTCTCAGTG TGAGGTGGTT ATGCTGGCTT CCTCCAATTC CTCCTCTTCG TCGGCTGTGA 000800
000801 CTGACCGAGA CAGCGGCTTG GGCTTCGGCA GAGACTTGAG ACTGCGGGCA CCCGCTGCCA TTAGGATTGT TGAATGAGCT 000880
000881 GTGAGAAGGG AGTGGGGGAT ATGGGACTCT TAGATTGAAA AAATACTGGA GCCTCTTAGT TGTTCGTCTA GTTTCACCTT 000960
000961 TTGATTTTGT TGATGAAAAA TAATTAACCA CAGAAGTAAC TTGCCCAAAG TCAAACAGCG ACTTAGTGAT GGAACTCGGA 001040
001041 CTAGAACCCG GTGTCAGTAT GAAAGAGGAT CAGCAATGTC TGTAAGGACA TGATTGTGAG AGAGAGAGTA GTGAATACTA 001120
001121 GGAAGGTGCC TCTTACAAAG TGGAGCCTAA GCCAGGACCT AAGCAAAGAT TGAGAGTTGA GGGCTCAGGC TCTGCAATGA 001200
001201 GTGTCAGTGA GGAGCTCCAG CAAAAGACTG AAATCACTCA TGCTTTCCTT AAACCCCTAA GGAAAGGGAA GGAAAGTAGC 001280
001281 CAGCTCCCAA TGAGCTGTCA TTTCAGGCAC TCTCTTGGCA ATAAGAGTAA TGTTAGTTTG AATTTATTGA ATCTTGCTGT 001360
001361 GCACTCAGCT GGCCCATTGT ATGTATACTC ATCTTAATGA TTACATAACT TCACAATTCA AACATCAGCT AAGTAAGGCC 001440
001441 TTTCCTGGCT GCCCATCTTA CGGAACTGGA GGTCATTATT CTAAGTGAAA TAAGTCTGGC ACAGAAAGAC AAATATCCCA 001520
001521 TGGTCTCACT CATGTGGGAG CTTAAAAAGT TGATCTCATG GAGTAGAGAT AAGTACCAGA GGCTGGGAAG GTGGAGTTGG 001600
001601 GGGAGGGAGG GAAGAGATTG GTTAATGGGT ACAAACGTAG ATAGAAGGAA TAAGTTCAAG TGTTTGATAG CACAGTAGGG 001680
001681 TGACTATAGT TAACAATATG TTATATATTT CAAAATAACT AGGAGATTAG AAATGTTCCA AACACAAAAA TGATAAATGT 001760
001761 TTGAGGTGAT AGATATCCTA AACACCCTGA TTTGATCATT ACACATTGTA TGCATATATC AAACTACCAC ACCCCATAAA 001840
001841 TATGTACAAA TATGTATCAA TACAAACATA AATAAAATTG CAATTTCCTG CATGCACTAA AAAAAAAAAA AAAAAAAAAA 001920
001921 AAAAAAAAAA AAAAAAAAAA AAA
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Predicted Small Protein

Name NONHSAT091480_smProtein_1196:1396
Length 67
Molecular weight 7340.3372
Aromaticity 0.0606060606061
Instability index 68.4651515152
Isoelectric point 9.36016845703
Runs 11
Runs residual 0.0160587915079
Runs probability 0.0441377206083
Amino acid sequence MSVSEELQQKTEITHAFLKPLRKGKESSQLPMSCHFRHSLGNKSNVSLNLLNLAVHSAGP
LYVYSS
Secondary structure LLLLHHHHHHHHHHHHHHLHHHLLLLLLLLLLEEEEELLLLLLLHHHHHHHHHHHHHLLL
EEEELL
PRMN -
PiMo -