NONHSAT091488

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT091488

Source

NONCODE4.0

Same with

,

Classification

sense

Length

689 nt

Genomic location

chr3+:121774224..121811009

Exon number

2

Exons

121774224..121774350,121810448..121811009

Genome context

Sequence
000001 AGGCTTGCAC AGGGTGAAAG CTTTGCTTCT CTGCTGCTGT AACAGGGACT AGCACAGACA CACGGATGAG TGGGGTCATT 000080
000081 TCCAGATATT AGGTCACAGC AGAAGCAGCC AAAATGGATC CCCAGTGCAC TATGGGACTG AGTAACATTC TCTTTGTGAT 000160
000161 GGCCTTCCTG CTCTCTGGTA AGAACCTTTC AGCTTTGTTA AGTCCTGGAA TCCTACTGTC TCCTGATGAG TCTGACCACA 000240
000241 GCAAGCCCAG GCCTGAGACT TGGTGGGTTT TACTCACTTT CTACTGAGCA TTGTACAAGA CCACATGCAA AAAAGACTTT 000320
000321 CCTGGAGAAG AAGGAAGTGT TATGATTGAG AGCAGCTGAT GGCAGGCAGC TGGGATGGAG CTCTCCCCCC CGTGTGCTTC 000400
000401 TTCCTCCTCT GCAGTCTCAC ATCAGTGAGC CTAGATGCTC AGAGTAGGGT AGCCTGGCCC ATCCCATGGG GATGGGGGAA 000480
000481 GGCTGCTGCA CTGAGGCCCC TGAGACTTGA CTCTTTTGTT CCACACATAT TCTCTTCTGG TCTTCTCTGA CCCTGTTTCT 000560
000561 GTCTTTCTCA GGCTCCTAGG AAACAACTGA CAGAATTCCA AAAGTCTCCC TTCATTCGGA GCACTGGCTT TCACGTCCCT 000640
000641 GACTTCCCTA CCCTCTCTCA CTCCCTTCCC TACAGCCCAT GCACATACC
[back to top]

Predicted Small Protein

Name NONHSAT091488_smProtein_113:286
Length 58
Molecular weight 6382.4041
Aromaticity 0.105263157895
Instability index 56.2668421053
Isoelectric point 4.82635498047
Runs 11
Runs residual 0.0390350877193
Runs probability 0.0253809959693
Amino acid sequence MDPQCTMGLSNILFVMAFLLSGKNLSALLSPGILLSPDESDHSKPRPETWWVLLTFY
Secondary structure LLLLLLLLHHHHHHHHHHHHLLLLHHHHLLLLLELLLLLLLLLLLLLLLLEEELEEL
PRMN -
PiMo -