NONHSAT091497

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT091497

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

924 nt

Genomic location

chr3+:122134884..122140747

Exon number

2

Exons

122134884..122135097,122140038..122140747

Genome context

Sequence
000001 TTTGCTCGTA CCAGCAGGTG TGCACTGCCG CGTCAATCTC CAACAAAGCC GGAAAAGCAG CCTGGCGCAT GTGCAAAGGA 000080
000081 AGTCCCTCCT ACCACTACCG AGCCGAGATG ACCAATGGGA GACGGCCATC TGCGCCTGCG CAAAAAAGTC GCCAATGTTC 000160
000161 ATTTCCGGTC TTTTTCGCCC CGCCCTTCAA ATGCGAAAGC GACTGCCTTC TTGGAATAAA ATACTTGGTC AGTGGAATCT 000240
000241 CTTCAACAAA ATAGAAGAGA AGCAGTCATG GAGTGAAGAA ATAAATCATC TTTGTTTCTA CTCATCTGTC ACTTATGCAA 000320
000321 TACATACAAT ATGTAAAAAG GAAAAATCCC TGTGTAATAG CCTAAGGCAA CCAGCAGCTT CCACGTCGGT TGGATATTAA 000400
000401 TAAATTTTTT TCTTTACTGT AAAATATACC CATCAGCttt tttttttttt tttttttttg agatggagtc ttgcactgtc 000480
000481 acccaggctg gagtgcagtg gcgcaatctc cacccactgc aagctctgcc tcctgggttc acaccattct cctgcctcag 000560
000561 cctcccaagt agctgggact acaggcgccc gccaccacac ccggctagtt ttttgtactt ttagtagaga cgaggtttca 000640
000641 ccatattagc caggatggtc tcgatctcct gacctcgtga tccacctgcc tcggcctccc aaagtgctgg gattacaggc 000720
000721 atgagccacc gcacccggcc ACTAGCTTTT CTAAGACACT TTGTTTGTTT TTAAATACCA GACCTCTGCT ATGACAATGT 000800
000801 TTGATTTTGT AAACTTCAGG TCAAATCATG TCTTCTGAAA AGTAACTGCA TATAAAACAC GTTGAGACAT TTGCTTAAGA 000880
000881 TGTTGATCCT GGTTTCAAGT AACAGCATAA GGGAATTCCT TTGA
[back to top]

Predicted Small Protein

Name NONHSAT091497_smProtein_68:253
Length 62
Molecular weight 6762.7752
Aromaticity 0.114754098361
Instability index 65.5770491803
Isoelectric point 9.50592041016
Runs 9
Runs residual 0.00527605049934
Runs probability 0.0200789024319
Amino acid sequence MCKGSPSYHYRAEMTNGRRPSAPAQKSRQCSFPVFFAPPFKCESDCLLGIKYLVSGISST
K
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLHHHLLLEEEEELEELL
L
PRMN -
PiMo -