NONHSAT091677
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091677 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1313 nt |
Genomic location |
chr3-:126095668..126113675 |
Exon number |
6 |
Exons |
126095668..126095816,126108478..126108744,126111026..126111089,126111890..126112136,126112326..126112377,126113142..126113675 |
Genome context |
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Sequence |
000001 GGCTGGGCCT GCGGGCCGCG GGACAGGGAG GGCGCGGGGC CGGGCTGCTG GGTCCGAGCT CTGGGCACGA TGTCCTCCCT 000080
000081 GACGCCGCCA GGACAGCGCC TGGCCCAGGC CTGGGCCTGG TGAACGCGGG TTTCTTCCTC TGAGGTTCAA CACTCCGCAC 000160 000161 TTGGGTTGGC TCCTTTCATC CTGATTGGTT TATTCGCCAC GTGCCAAGCA CTGAAGAGGG CGTGCAGGAT GGATACTTTT 000240 000241 GGAGCAAAAA TAGCCCTGCT TCTTTCCTGG GGAGGGATCG CACTTTCTAG AGGGgcggtt ttcaaagtat ggtctcagga 000320 000321 ctagcagcat cgaaaatgct gggaactcgt tagaaaagca agttttcaat cctcgcccca gaatcagaaa ctcggggtgg 000400 000401 agcccagcaa tgtgtgtcct gacaagtcca cgcgcgaccc cagtgctggc tagggttgca aagccactgC TCTACGGAGC 000480 000481 GAGCGAGATC CATCATAGTG GGACAAGCGA GAGGATGAGG CCATACAGAC CAGGGTTTTA GCAAACCACA AGAAGCACTT 000560 000561 CATAAACTGG TGACTCAAGT AGAAAAgtac tgttccacgc acttgacacc aatccaccca tttcacctgc atgatcaccc 000640 000641 tGCCTTTGCA TGAGTTGCCG GTGTGGACAG AGCAGGGACA CAGTGAGACA GCGGATTCCA GCTTTGCTCT TACCTAGAAC 000720 000721 ACACTGCCTC TCACCAGGAA TCGTCCTTCC ATTTTATGCA GTTATCCCAG ACAATGATGC ACAAGCTTTG GGAAAAAAAC 000800 000801 CCCACAAGTC CAAAGGTGTA CTTCATAATA AAGCACCTGG TCTCACCGTT GTTCTACAGC ACAGCAGGCC AGGCTGGATT 000880 000881 GGAGAGTCAC CTTCAAGAGC CATGATCACT TCACGAGGAC CTCTGCTGGt gtctcctctg ctgtcctgga ggtcccagag 000960 000961 gacaggagct gtgtcctgtg acctgctgac cgcaacgcgt agcacctgga aggtgttcat aggatagttc ctcaaatgag 001040 001041 tcaatGGACA GTGAATGGGG AATGGAGTGG ACGGTGGACG GGAGGGCAAG TTGTTTCCAT GAAAGGAGGA AATTCCTGTG 001120 001121 GAGGGAGTGG ACAAGGCATG CCTGTTTGAG CCACGCGCAG ATGAGAACAC CTATGCTGCA TGAGTCAGAA GCAAGTATCA 001200 001201 GAAGATGATG GATCTCATTA CTTAGAGAAA AGAAGGCCTC AAACCCATTG CACATGGGTA GGGAGGATGA AAAGAAACAC 001280 001281 CCACAGAGTT AAGCCACAAC ACTGGGAAAA CTG |
Predicted Small Protein
Name | NONHSAT091677_smProtein_1043:1207 |
Length | 55 |
Molecular weight | 6633.4644 |
Aromaticity | 0.111111111111 |
Instability index | 49.5759259259 |
Isoelectric point | 7.90899658203 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0438463673757 |
Amino acid sequence | MDSEWGMEWTVDGRASCFHERRKFLWREWTRHACLSHAQMRTPMLHESEASIRR |
Secondary structure | LLLLLLLEEEELLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |