NONHSAT092089
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT092089 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
815 nt |
Genomic location |
chr3+:129800804..129817233 |
Exon number |
8 |
Exons |
129800804..129800879,129810082..129810214,129810944..129811065,129811944..129812003,129813246..129813310,129814892..129815006,129816018..129816093,129817066..129817233 |
Genome context |
|
Sequence |
000001 GGCTGGAGAA ATAAGCAGTT CCTTGCTAAG AAGTCTGAAT TTTAACCTGA AGGGACATGG GAGCTACTGC AGGCTGCCCT 000080
000081 GCCATGATTT CATTGCAGGG CTGTGACCGT CTACGACAAG CCGGCATCTT TCTTTAAAGA GGCACCTCTG GACCTGCAGC 000160 000161 ACCGGCTCTT CATGAAGCTG GGCAGCACGC ACTCTCCGTT CAGGGCCCGC TCAGAACCTG AGGACCCAGA CACAGAGCGG 000240 000241 TCGGCCTTCA CGGAGCGGGA TTCTGGGAGC GGGCTGGTGA CGCGTCTCCA CGAGCGGCCA GCCCTGCTGG TCAGCAGCAC 000320 000321 AAGCTGGACA GAGTTTGAAC AACTGACTCT TGACGGACAG AACCTTCCTT CTCTCGTCTG TGTGATAACA GGCAAAGGGC 000400 000401 CTCTGAGGGA GTATTACAGC CGCCTCATCC ACCAGAAGCA TTTCCAGCAC ATCCAGGGTC GGTGGACCTG GATGTCTGTC 000480 000481 TGGACACGTC CTCCAGTGGC CTGGACCTGC CCATGAAGGT GGTGGACATG TTCAGGTGCT GTTTGCCTGC GTGTGCCGTG 000560 000561 AACTTCAAGT GTTTACATGA GCTGGTGAAA CATGAAGAAA ACCGCCTGGT CTTTGAGGAC TCAGAGGAAC TGGCAGCTCA 000640 000641 GCTGCAGTAT TTTGCAGATG CTTTTCTCAA ACTTTCCTGA TCCTGAAGGC AAGCTAAACC AGTTCCGGAA GAACCTGCGG 000720 000721 GAGTCGCAGC AGCTCTGATG GGATGAGAGC TGGGTGCAGA CTGTGCTCCC TTTGGTTATG GACACATAAC TCCTGGGCCA 000800 000801 GAGGCTAAAA CCCCA |
Predicted Small Protein
Name | NONHSAT092089_smProtein_512:679 |
Length | 56 |
Molecular weight | 6394.4231 |
Aromaticity | 0.109090909091 |
Instability index | 43.8345454545 |
Isoelectric point | 5.14031982422 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.0205874323522 |
Amino acid sequence | MKVVDMFRCCLPACAVNFKCLHELVKHEENRLVFEDSEELAAQLQYFADAFLKLS |
Secondary structure | LLHHHHHHLLLHHHHHLHHHHHHHHHHHHLLLEEELHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |