NONHSAT092089

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT092089

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

815 nt

Genomic location

chr3+:129800804..129817233

Exon number

8

Exons

129800804..129800879,129810082..129810214,129810944..129811065,129811944..129812003,129813246..129813310,129814892..129815006,129816018..129816093,129817066..129817233

Genome context

Sequence
000001 GGCTGGAGAA ATAAGCAGTT CCTTGCTAAG AAGTCTGAAT TTTAACCTGA AGGGACATGG GAGCTACTGC AGGCTGCCCT 000080
000081 GCCATGATTT CATTGCAGGG CTGTGACCGT CTACGACAAG CCGGCATCTT TCTTTAAAGA GGCACCTCTG GACCTGCAGC 000160
000161 ACCGGCTCTT CATGAAGCTG GGCAGCACGC ACTCTCCGTT CAGGGCCCGC TCAGAACCTG AGGACCCAGA CACAGAGCGG 000240
000241 TCGGCCTTCA CGGAGCGGGA TTCTGGGAGC GGGCTGGTGA CGCGTCTCCA CGAGCGGCCA GCCCTGCTGG TCAGCAGCAC 000320
000321 AAGCTGGACA GAGTTTGAAC AACTGACTCT TGACGGACAG AACCTTCCTT CTCTCGTCTG TGTGATAACA GGCAAAGGGC 000400
000401 CTCTGAGGGA GTATTACAGC CGCCTCATCC ACCAGAAGCA TTTCCAGCAC ATCCAGGGTC GGTGGACCTG GATGTCTGTC 000480
000481 TGGACACGTC CTCCAGTGGC CTGGACCTGC CCATGAAGGT GGTGGACATG TTCAGGTGCT GTTTGCCTGC GTGTGCCGTG 000560
000561 AACTTCAAGT GTTTACATGA GCTGGTGAAA CATGAAGAAA ACCGCCTGGT CTTTGAGGAC TCAGAGGAAC TGGCAGCTCA 000640
000641 GCTGCAGTAT TTTGCAGATG CTTTTCTCAA ACTTTCCTGA TCCTGAAGGC AAGCTAAACC AGTTCCGGAA GAACCTGCGG 000720
000721 GAGTCGCAGC AGCTCTGATG GGATGAGAGC TGGGTGCAGA CTGTGCTCCC TTTGGTTATG GACACATAAC TCCTGGGCCA 000800
000801 GAGGCTAAAA CCCCA
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Predicted Small Protein

Name NONHSAT092089_smProtein_512:679
Length 56
Molecular weight 6394.4231
Aromaticity 0.109090909091
Instability index 43.8345454545
Isoelectric point 5.14031982422
Runs 11
Runs residual 0.0484848484848
Runs probability 0.0205874323522
Amino acid sequence MKVVDMFRCCLPACAVNFKCLHELVKHEENRLVFEDSEELAAQLQYFADAFLKLS
Secondary structure LLHHHHHHLLLHHHHHLHHHHHHHHHHHHLLLEEELHHHHHHHHHHHHHHHHHHL
PRMN -
PiMo -