NONHSAT092125
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092125 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
572 nt |
Genomic location |
chr3-:130637070..130637964 |
Exon number |
2 |
Exons |
130637070..130637547,130637871..130637964 |
Genome context |
|
Sequence |
000001 AAATGCCTGC GTGGAGAGGT GGAAACAAGT GTGGGGTCTG CGGGAGGGCC GTGCACCACG CAGAAGAGGT GCAGTGTAAT 000080
000081 GGCAGGAGCT TCCATGCTGC TTTCTATGCA TGATTTGCAG GAATAATTTA GATAGCAAGA CAGTGGCAAT TCATGATTAA 000160 000161 GAGATTTACT GCAAATCCTG CTATGGAAAG AAGTATGGGC CAAAAGGCTA CAGTTTATGG CCAGGGCGCT GGCATACTTA 000240 000241 ACATGGACCG TGGTGAGAGC CTGGGCATCA AGCCAGAGTG TTCAGCCTCA CATGCCTACA AGCAAATCCA AAGACTTCTA 000320 000321 AATTTGCTCA GAAATACAGA GGTGCTGAGA AGTGTTCCAG ATGTGGGGAT TCCGTACATG CTGCTGAGAA GGTAACTGGA 000400 000401 GCTGGAAAGC CCTGGAACAA AAACTATTTC CGATGTGCAA AGTGTGGGAA GAGTCTTGAA TCAACAACTC CTGACTGAAA 000480 000481 AAGAAGGTGA AATCTATTGT AAAGGGTGCT ATGCAAAGAA CTTTGGGCCC AAGGGATTTG GCTATGGCCA AGGAGAGGGC 000560 000561 TCTTGTTCAT GC |
Predicted Small Protein
Name | NONHSAT092125_smProtein_152:394 |
Length | 81 |
Molecular weight | 8962.4196 |
Aromaticity | 0.05 |
Instability index | 52.965 |
Isoelectric point | 10.1170043945 |
Runs | 13 |
Runs residual | 0.0236842105263 |
Runs probability | 0.0450314567963 |
Amino acid sequence | MIKRFTANPAMERSMGQKATVYGQGAGILNMDRGESLGIKPECSASHAYKQIQRLLNLLR NTEVLRSVPDVGIPYMLLRR |
Secondary structure | LLLLLLLLHHHHHLLLLEEEEELLLLEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHHHL LLEELLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |