NONHSAT092154
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092154 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
579 nt |
Genomic location |
chr3+:131236671..131239724 |
Exon number |
2 |
Exons |
131236671..131236753,131239229..131239724 |
Genome context |
|
Sequence |
000001 ACTCTAGAGC ATCaagacaa aaatctcagt cttcgaggaa ctcacagtgt agcagaaaag acaaaggagg taaacagGAG 000080
000081 GAGCATGAAT AATTCATCTT GATGTAATCA TGCAAGACTC CTAAGAAGAT GTTAGGAGAC CCTGTCATCA TTCTTTTGGC 000160 000161 CTCTAGTGTC CTTTATCTTC ATGTTTGCTG GCTTCCTTTT ACTACTATGG AAATACAACA TATGCAAAAG TAGTGTTTTC 000240 000241 ACTGTTTAAA AACATCGTCA GCAGCATCAT CATCATTAAC TGCACCAGGA AGCCATGACT CCTTTCTGGA CAAGGTGCAC 000320 000321 TTGCCTGTCA TCCTTCCATC TCTTTCTTCC TCCTTGAAGT TCACAATACC CAGTCCAGGA GCATTGCAGA GAATGCTAGG 000400 000401 TGTGTCTGCA GACTTGACTT TAAAAGAAAA CAAGTTCCTT CAAGTGAGTT CATCATGATG GGAATGATAA TTTGTTTGAG 000480 000481 AGAATGTGTG TTCTTTGGCA AAGGAACTCC TGTTATACCA TGACAGTAAT AATAGCAGTA ATAAAATCAC Caataataaa 000560 000561 tttacttttg aatttattt |
Predicted Small Protein
Name | NONHSAT092154_smProtein_128:232 |
Length | 35 |
Molecular weight | 3928.7472 |
Aromaticity | 0.0882352941176 |
Instability index | 52.0705882353 |
Isoelectric point | 5.94903564453 |
Runs | 8 |
Runs residual | 0.0491437081162 |
Runs probability | 0.03695239357 |
Amino acid sequence | MLGDPVIILLASSVLYLHVCWLPFTTMEIQHMQK |
Secondary structure | LLLLLLEEEELLLHHHHHHEELLHHHHHHHHHLL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii |