NONHSAT092369

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT092369

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3262 nt

Genomic location

chr3+:139155377..139165157

Exon number

2

Exons

139155377..139156501,139163021..139165157

Genome context

Sequence
000001 gttgaattgt tttcctccac aaaattcata tttcaattcc taacccccag tacctcagaa tgtgagcttc gtcagaaata 000080
000081 gactcattgc agttgttatt agttaagatg aggtcataat gaggtagcgt ggacccctaa tctactgtga ctggtgtcat 000160
000161 tatacagagg gcaaattcag agactcattc agggagaaca gggaatatga aggcagagtt tggggtgata cagcagaagc 000240
000241 caaggaatga caaatcctgg aaagcagcat ggaacaggtt ttccctcaca gcgcttagaa ggaaccaatc ctgccaacaa 000320
000321 cttgatcttg gacttctatc ttctagaact gtgagaccat acagttctat tgtttaagcc acccactttg tggtactttg 000400
000401 ttatgacaac cctagcaaat taatacTAGA GGGAGGACTA GATGTTGGGG AATCCATCAC CATGACCACT GTGCCTACCA 000480
000481 TTAGGTAGTG AATGTTAAAT TAATATCTCT ACTACAGTGT ATGTCTAAAA TGTGagaaaa gcagcagcat gaaataaaag 000560
000561 gtgcccaggc tttggaatcc agagatctgg gtttaagcta tgcccctgac tagctatgtg actttgaacC CTTTAACTGT 000640
000641 GAAGTCCACC ACTGAGATAT GAGATGGGAT ATCCATGATC AATTATTAGC ATAAAAGATT TCAAAGACAT TTCCCTCCCT 000720
000721 CAGTCCACCA ATGAGAATAC CCACCAATTT TCCACCTGCT TCAATTCTAT CCCTACCTCA ATTCCTCTCT ACCCCACCCC 000800
000801 ACACCAGGCA AGTTTGAAGT TGTTTCTGAA GAACTAATTG AGTagagaag gacaagaaag tagaaaagaa agaagaaaga 000880
000881 gaggaagaaC TTAGACTTTA GGGAAGGAAG TCAGTCTGTA GAATAAAGAT TTAAGAGAAG GAAGGGAGGA GATGAGGGGA 000960
000961 GAAAATGTTG AGATGGCTGG GAGTAGAGAG AATTTTGAGG GCCTTTAGCC AGTGAAGGGC ATCAGTGAGA GTGGAGTATA 001040
001041 CGAGATTTAG GTAGAAGAGA AAATAGATTT TCAAGGAGAT TTGTTAGGGG TTATGGATTA GATCTCCCTA TTACATTTTC 001120
001121 AAAAAtagag catgttacaa atagaatatc attCCTCTGT GGCTAGTGGA TTACAGGGAA CTCTTTTATT TTAATGAGAA 001200
001201 ACACATAAAC CATTGACTTT GGGTCTTCCA ATTTCTCCAG TTAATTTGCA GGTTCTCCCT CTGCCTGCCA CCCCACCCAG 001280
001281 CAAGGAGGAG AGGAAGTGTT GAGAAGGGAA GAGATgagtc ctggccctgt cacttcttag gggtgtgctt ttgaacaacc 001360
001361 tgctcaccat gtatgaactt cactcttctt gtttataaaa tgaggacaat gacacctgca agactgtgag gtttaaaAAC 001440
001441 AAAAtctgtg ttgagaggta acttgcctct tttacttacc aatgatttcc tcaatgcctg gtgactgggg ctggttcata 001520
001521 ctagacgatc aataaatgct ccttgaatga atAGGTGGAT GAAAGAAATG TCTGGCATCT ATCACAGGTG CTGGCACTGA 001600
001601 TAAGTGCTTG ATAAATAGGC TGGCTGACTG TGAGTGATGC TGACGGGCAA AGGACAGAGA CACCAGGAAG GAGAACAGGA 001680
001681 CACGAAAGAT AACTGTCTCA GCCCTTGGGG AGTTTCTGAC CCAGGAGGAT GGGAACATCA ATTATCAATA GTTACAGATC 001760
001761 ATTAAATAAT TGCAAGTGTG AGGCGCACTA TAAAGAGGAG GCTCAGAGTC CCCGCATGCT CACACTCACA CCTGGCCACA 001840
001841 GACAGGTGAC ACCCCTGGCT TGCCCAGGCC AGCGGGTCTG CAATGAGGCC AAGGACCTGG GCTCTTGAGA AGTTTTAAGT 001920
001921 TTGAAAACAT TGCTTTTTAA GCTTAAAACA ATGAACCTTA ATAAAAGTAA ACACTTCCAT TGAGCTTTGA AACACTTAAT 002000
002001 AGGAGTTAAA AGTAATTAGG CTAATAAAAT AGTCTTTTGT TCCAATTCAA TAAGTGCTTT CTTTTATTAA CTTCATTGTC 002080
002081 CTTTAAGATT GGGATTAAGG TTTGTCTGCA TTTGGAAAAG GTCACATTTG CCCAAAGACT GATGGGTGAT AAcagtaagg 002160
002161 cagccccctg cacagggaga ggccagtaag agcctgggct ccatgaaact gcatttcaac tccaaccctg atgtcctgcc 002240
002241 tgtctcctgg gcatgtttat cttacactgc taagcatcag tctcatttgt acagtgagaa taatatcact gtgtaaggtt 002320
002321 gtattgagaa ttaagagagc tcacgtatgc ctgtaaagta cctggcatac cgcagggtac aAGGAGGGCG TTGTTAGCTG 002400
002401 TGATGGCCCC TTTCCTTCTT CCCTTTACTT CAGAGGTGAC CTCTCCAAAT CACATTTAGT CCTTAAACCT CAGGTCAGGC 002480
002481 GATAGTGCTG ATGGGCAACC CTCCCACCCA GGTTTGGCTG CAAGTCActc ctctgggctc ctctgggctc ctACAGCCTC 002560
002561 CCGCATGGTC CCTCTCATGC ATCCTTGTGA TGGTCTGACC AGGAGCTTCT TGAGGACAGG GGTTGGGGCC ACTTGCCTGC 002640
002641 GTGCTTCTCC Atgcccattt gctatcagat gccttcccct ttctgctctg cactgcgggg aactacattt tccaggctcc 002720
002721 ctgggcagtg gcaggcttcc ggctagtttc taccaagggg agcgctgatg ggagatgaaa aagtgggaaa aaaggagaag 002800
002801 ccaggatgct tctctgtctc gtcttccttt ttctctttca ggggtttttg gtagtggctg tgtctccctg atagctcctc 002880
002881 tctatgatcc agccctgctt ggcagccctg gcttctgggt tctgaaaaca ccacgttcct ccttgtgtcc ctctatctag 002960
002961 taattggcag ctttctgatg ttgctaagtt ctgacttgct tcaccatctc ctatttggct cctcagcttt tccatcttct 003040
003041 gtgtaacctg ttccccgtac taaatttcct ctgtgtgaaa tgcctagcat ggtttctgtt tccgtggtgg gactcagacg 003120
003121 gatacaTTct gtgtccctaa gcctctgaca cagcacctga cccatgatag gatctcagga agctcttttt tggctgagta 003200
003201 catTTCCCAT TGTAATATTC CCCAAAGGTG GGATTTTGTT CATCTTTTTA CAGGCTTTCC TC
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Predicted Small Protein

Name NONHSAT092369_smProtein_2564:2767
Length 68
Molecular weight 7158.3443
Aromaticity 0.0746268656716
Instability index 60.5971641791
Isoelectric point 8.80780029297
Runs 7
Runs residual 0.0388372274752
Runs probability 0.0448305448305
Amino acid sequence MVPLMHPCDGLTRSFLRTGVGATCLRASPCPFAIRCLPLSALHCGELHFPGSLGSGRLPA
SFYQGER
Secondary structure LLLLLLLLLLLLHHHHLLLLLLEEELLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLL
PRMN -
PiMo -