NONHSAT092386

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT092386

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2939 nt

Genomic location

chr3-:139397462..139401406

Exon number

2

Exons

139397462..139399830,139400856..139401406

Genome context

Sequence
000001 AGTTTGGCCT TATTTTCTAG CAAAAACTCA TTGCTTAGCT GCATTTAATA ATCCATGGAA CATTTCTATT AACTTCAGTG 000080
000081 TGTGAATTGT GTGACTGCAG AATGGGTAAA AAAAAAGTGA GAATCAGGAA TACAAAATAT GCAGAAAATG AAAATAAGTG 000160
000161 AGATGTTAAA TATTTGATCA AGGCCTTTAT TTTCAGGTAA CCAGTTGCCA TCTTGGGGTC TCAAATGCCA ACAGAAGCCA 000240
000241 CAGAATACTA TTCTGAATTA TTAAAGTGAC TAGGAGAACC TTGTTTCTTT TTACTACTTT TAAATGAGTA TGTAGCCTCT 000320
000321 CAAGCTAACC TTTGCTTAAA CATTTAACAT AGACATTGGG TGAAATATAA AAAAGCAAAA GTTCTCAGTC TAATACTCAA 000400
000401 CCTGTAATTA TAAATCAGAT TACATAATAC AGCTCAGCCA TTTCATTTTA TTTTTCTGTG TTCTAACAAT TTTTTTCAGT 000480
000481 TTGAGAGGAA CCTAACCAAG ATTAGTTGAA AGTCTGCATT CTAGAATATT TTTATCTGTA TGTGTACTGA AAAGTCCACC 000560
000561 AGTCTCCCTT TTACATTTTA CTTTTACCCA CTCAAAGCTT GCTTTTCCTC AGCGACAGGT CAGAAGTCAA GGTTAGAATA 000640
000641 GGTTCATCCA AATACAGAGG CTGCCCCAGT CTACGGCCTC ATCACAATCC ATCCACAAGC AAGCTTTCCA GAATGGCCTC 000720
000721 AGGTCCATCC CAGGACTGTG ACTCTCAGCC ATCTGCACAT TGCTTACTGC CCAAAGAGTT CCTCCTGAAA CTTCATCAGC 000800
000801 ACACTGTTAA GTGATAGAAG GAAACTGCAG AATAGTGTTA TACTGTAGCC AGATCTCATT TTAGTAATGA CATTTTTATG 000880
000881 CCTAGAAATA ATGTTTTAAA TGTTCAAAAA TATGAGCTAA GTGGTCAGTT CCAGCTTTTT TCCCTGTAGA GACCTGTCTC 000960
000961 CTGCAGCCTT GGGTGGGATG ATTCCAAGGC ATGCTCTTCA CACAGTTTTC TAGGGTTTTC CCCTAGGATT AAGCCCTAAA 001040
001041 CATCTATTAT AGTAGCTGGC TTAATCTTTT ATTGAGCTCC CCTTTTCTTC CCTGTATTGC TTCTTCATTA CTCTGCTGGT 001120
001121 GTTCCATGTA CCTCTCAAAT AACTACTTGC ATTAATTCTT ACCTCAGGAT CTGGTTCTGA GGCACTCAAG CTGAGACATC 001200
001201 CTCTATGTAA AATCTTCCTC CTTCCTGAGG TGGCATTAGG TGGTCACCTT CCTTGAGCCA TAATGGCAGA TAGGATCCAG 001280
001281 GAGAAATGAA ACTTACCAAT AAAGGAGAGA TCTGAAAATA TTATTCCCAT TATACCCATA ATCCAGTAGT CTTTTTGTGA 001360
001361 GCTTAAGCAA ATACAAGACT TGCATTTAGG TATTCCTCCT TCTAAAAAAT TAGGAGGTAG TTGCCTCTCC AAAATGGATT 001440
001441 TCTCAGCCAT TGCGTCTTCA CCGCTTAGGT TAGGTAAAGC TTGGCTATTA TATGAGGTTC TTACCTTCCG GCACAAGGGG 001520
001521 ACGCTACTTT TTTAAAAAAA TATTTTTATT TCCATAGGTT ATTAGGGAAC TGGTGGTATT TGGTTACATG AGTAAGTTCC 001600
001601 TTAGAGGAGA TTTGTAAGAT TTTGGTATAC CCATCACCCG AGCAGTATAC ACTGAACCCA ATTTGTAGTC TTTTATCTCT 001680
001681 CACTCCCTTC CCATTCTTCC CCTCTGAGTC CCCAAAGTCC ACTGTGTCAT TCTTATGTCT TTGCATCCTC ATAGCATAGC 001760
001761 TCCCACTTAT GAGAATATAC CATGTTTGGT TTTCCATTCC CGAGTTACTT CACTTAGAAT AACACTCTCC AATCTCATCC 001840
001841 AGTTGCTGTG AATGCCATTA ATTCATTCCT TTTTTCTTGC CTAGGAAACC AGGCTTCCTC CTAGACCAAG CTTTAGTCTT 001920
001921 CACTACCTCA GGCAGAGAAA GCTTCCCTTG CATGAGGAAG TCATTGCCCA GCCTCTTCTC TGCTCTCTGT GTGCAGCTTC 002000
002001 TCCCTCCCTG GCCTAGGGCC CTGACCCAGA ATGACTCTTC AGCCCACGAT TTTAATCGAA GGCCTCTAAT CAACCTGTGG 002080
002081 TACTACATGC TACACAAGAT TCTCAGAAAT CCCTAAGCTT TCTCATGAGC CTCCCACCCT GCTGGGAAAT AAGCTGACTT 002160
002161 ATCAATTAAA GAATATCCAA AGATGTTAAG CCACTTAATC CTCCCCAAAA CTCAGTGCGG TAGGGGTTGT TACCTCCCAT 002240
002241 TATACGAAAG GAAAGTGAGG CTTGGGAAGT AAAGAGACTT GTCCAAGATC ACCTTCTGGA GCCACATTTT ACACCACAGG 002320
002321 TAAGAGAAAA GGGATCCGAG AGGGCACGGA CACTGTGTCT TCAGACTGAG TGGGGAAGTA CCATTTACCT GGGTACTTAT 002400
002401 TGGGTGCAAG TTGCATGCCC CCGGTGCTAA TACACAAGGG ACAAATTTAT GGGCCTCCTA AAACTGTGGA CAGTGCACCC 002480
002481 GTCCAGCCAA CTTCATGGGT GCACCGTGAG GCTCTGGTGA TGTGGACAGG CTTATAAAAC ACTCTCCATA CTAAGATGAG 002560
002561 GTTGTGTTCC TGTGTCTAGG AAACGCTGGA AATTAAGTGT ACAGCAATCA AAAAACCTTG ACATCATCCT TGATGTCTCT 002640
002641 CTTTTTCGCA CACTCCAATT CACTCCATTA GGAAACTGTA TTGGCAGAAT CTAGTGAATC TTGTCCTTCA AGGCCTCTCT 002720
002721 CTGCAAGGCT CCCATGAGCC CTGGGGGCTT ATGGAGAGTT CTGGGTGGGC AGAGGAAGCC AGACTGCGTT AGGGAAGCAA 002800
002801 ATTTGGGACC TAAATTTCCT AAGAAGGTTT TAGGGGATAG GGACCCCAAT CTCTAAGACC CCAGGATTCT GTTAAGATTT 002880
002881 ATTTTCTCAT TCCAAATAAA TGTCCACTGG CAAGCCCTAA AAAAAAAAAA AAAAAAAAA
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Predicted Small Protein

Name NONHSAT092386_smProtein_2414:2536
Length 41
Molecular weight 4438.1792
Aromaticity 0.075
Instability index 47.44
Isoelectric point 8.29449462891
Runs 7
Runs residual 0.00302419354839
Runs probability 0.0130088071265
Amino acid sequence MPPVLIHKGQIYGPPKTVDSAPVQPTSWVHREALVMWTGL
Secondary structure LLLEEEELLEELLLLLLLLLLLLLLLLHHHHHHHHHHLLL
PRMN -
PiMo -