NONHSAT092431
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092431 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
572 nt |
Genomic location |
chr3+:141105288..141122848 |
Exon number |
2 |
Exons |
141105288..141105779,141122769..141122848 |
Genome context |
|
Sequence |
000001 GATCATGCAT TTTTCTACAA GCCTGCCGGC ACCATTTAGG ATTTTGAAAA ATAATCTAGA AATGCTATAC CCTTTATCAA 000080
000081 AATTATTTTT TACTTTGCAA GAGCTTAACA GTTTTGGTTT TTTCTTAGCA ATTCTATAAA ATTAACATCT ATAAAATGCA 000160 000161 TCCCGGACCA GATACATACT GTATTGAAAG CTTTCTTCAG GAAGAGAATA TGAGAGTGTT CTTTCCAGCT TATTTTCTTC 000240 000241 CTTAGCAAAA GGATTGTTTG ATTCTCAGAA GCAGAAGGAC ACATTCATTG TGGAGCAGCT CTGCTTAAGT GTATGAAATG 000320 000321 CCTTCTGTCT GGTTGCAGAA TTTGGAGTTT ACTAAACAGT GTTTAGTGAT TGGGCTCATC TTGCATCACC AGTTGATGAC 000400 000401 ATTTTTCTTT GTTCCCTCCT ACCCAGTTGA ACCAAGACTC TGAGGCTGAT ATGCAATGTC ACTTACAACA TTAATCAGAT 000480 000481 ACTGCATTTA AGATCTTGAT GTGGAAGAAA TGGAGGACTC AGAACCAAGG ATTTCCAAGT GATTTCTTCC AAAGCACAGG 000560 000561 AATCTCACTC TG |
Predicted Small Protein
Name | NONHSAT092431_smProtein_317:442 |
Length | 42 |
Molecular weight | 4873.8002 |
Aromaticity | 0.146341463415 |
Instability index | 71.7219512195 |
Isoelectric point | 6.69329833984 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0438337497161 |
Amino acid sequence | MPSVWLQNLEFTKQCLVIGLILHHQLMTFFFVPSYPVEPRL |
Secondary structure | LLLLHHHLHHHHHHHHHHHHHHHHHHLEEEEELLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiii |