NONHSAT092582
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092582 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1255 nt |
Genomic location |
chr3-:147127415..147128875 |
Exon number |
2 |
Exons |
147127415..147127501,147127796..147128875 |
Genome context |
|
Sequence |
000001 GCGTCCTTTT GTGGATCTTT AAATTCTCGG AGCGCGCGAA GACCTTGCCA CAGCCAGGGA AGGGGCAGGG AAAGGGCTTC 000080
000081 TCGCCCGTGT GCACGCGGAT GTGGTTAACC AGTTTGTATT TGGCTTTGAA GGGCTTGCCC TCGCGCGGAC ACTCCTCCCA 000160 000161 GAAGCAGATG TGATTACTCT GCTCCGGGCC ACCTACGTGC TCCACGGTGA CGTGCGTAAC TAGCTCGTGC ATGGTGCTGA 000240 000241 AAGTTTTGTT GCACGACTTT TTGGGGTTGG CCAGCTGCTC GGGCTCGATC CACTTGCAGA TGAGCTCTTG CTTGATGGGT 000320 000321 TGGCGCATGT AGCGGAAGAA GGCGCCGGCG CCGTGATGCG CGGCCATGTT CACGTTCATG GGCCCGTAGC CGTGCAGCTG 000400 000401 CGGCGCAGCA TAGTGCTCCG AACGCGGGCT GGTCACCTGG CCGTACTGCT CCGGTCGCGG GTACATGTCC CCCGAGAAGC 000480 000481 CGAGCCTCAT CTGCCCGTTG ACCACGTTAG GCGACGCGTG GCCGGCAGCC TGCTCGTGAA GCCCGGGGAA GAGGAGGTGG 000560 000561 CCCGCGGCGT CCGTGTGGCC GTGTGGGCCC CCGAAGCCCC CGGCCGATGC AGCAAAGAGG CTGTGCTGTG CGCTGGCTGC 000640 000641 CGCCGCCGCG TCGCCAAAAC CCCGGTTGCG GAACAGAAAG TCCCGCGTGG AGTTGAAGGC TGCGCTGGAA TAGGAGCCGA 000720 000721 CGTGGCCCGG GTGATGGTGA TGGCCCAGGG CCGCAGCAGC CGCGTAGCCT GGCGCCTGCG ACGTGAAGGC CGTCTGGCCG 000800 000801 GCCGAAGCCA GCTCGTGCGA ACTGGGGTTG AGCTTGAAGG CGCCCATGCC GTCGGCGAAC GGGTTGATGC CCAGGCCCAC 000880 000881 GTCTCGTTCG GCCACGTCGC CCGCGGAGTG GTGGCGGGAC GCGCCAAAGG TGGTCACGCC GATCGCTGGG TACTGGGGGC 000960 000961 CGGCGTCCAG GAGCATCGTG GCTGCTCGGG GCGAGCCCCG GCCTCCCCCG CCCCCCCCAC CCTCGCCAGC CGAGGAGGGA 001040 001041 AAATCGGGAG GAGGAGGAGG AACAAGAGGA GGAGGAAGAG GAATGTGAGC GCCAGTGCCG CGACTGCTTC GCCCTCTCTC 001120 001121 CGCCTCGCGC AGCGCGCCCC TCCTTACTTC TCCACTAGCC CCTCGCCGCT CAGTCTCTGC CGAGAGGGCC GCGCGTCAAG 001200 001201 GCTGCCCGGG GAAAGGCATG GAGCATCTCA GCCCCCTAAA AAAAAAAAAA AAAAA |
Predicted Small Protein
Name | NONHSAT092582_smProtein_845:1087 |
Length | 81 |
Molecular weight | 8115.0447 |
Aromaticity | 0.05 |
Instability index | 78.35875 |
Isoelectric point | 11.2321166992 |
Runs | 11 |
Runs residual | 0.00131578947368 |
Runs probability | 0.0335790335792 |
Amino acid sequence | MPSANGLMPRPTSRSATSPAEWWRDAPKVVTPIAGYWGPASRSIVAARGEPRPPPPPPPS PAEEGKSGGGGGTRGGGRGM |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHHLLLLEELLEELEELLLLLEEEEELLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |