NONHSAT092654
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092654 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1756 nt |
Genomic location |
chr3+:149375997..149379207 |
Exon number |
3 |
Exons |
149375997..149376495,149377165..149378106,149378893..149379207 |
Genome context |
|
Sequence |
000001 CTGGGTAAGA GGAGACGGGT GCCCCCCACC CACTCCTCCC GGCCGCGCGG ACCTCTCCCG CTCAGACCTG CATCTGCATT 000080
000081 CCTTTGAGTT TACCACGGAC TTGGGGCGGG ATCAAAGGGA AAGTGGCCTG AGCCTGTTTC ATCAAGGGGT TGTGGACCGA 000160 000161 AACCAAGGCC GGGGGTGGCG GAGGGCACGC GGATGAGGGG CTCAGGCCTA GGAAGGGCCG GTCCTGGACA CCGCGCCCTC 000240 000241 CCCTGCAGCC AGGCGCCGAG GCCTGCAGCA CCCGGAGCGC CGCACTGACC CGCGATTCTG CCCGAAGGCC GGCCCGGGTG 000320 000321 CGCCCCGGCG CGGGGAGACA CCAACAAGGC CAGCTTTTCC ACGAGAGGCT GCTTAGCTCT TGTGACCATA TTTGGTCTGG 000400 000401 CGAGGAGGCA TCTTGGCTGC CTGGCTCTCA ATTGTCTGCT AGAGCACAGA CGGTGCCCAG AAAGTGCCTC TGTCACTGGA 000480 000481 GATGCGGCTT CGCCAACGGG CTTGAGTGCA ATAGCTCCAT CTCAGCTCAC TGCAACCTCC GCCTCCCGGG TTCAAACGAT 000560 000561 TCTCCTGCCT CTGCCTCCCA AGTAGCTAGG ATTAAGACGC CTGCCACCAC GCCCAGCTAA TTTTTGTATT TTTTAAAAGC 000640 000641 AAAAATGGGG TTTCACCATG TTGGCCAGGC TGGTCTCAAA TCCTGACTTC AGGTGATCCG CCCGCCTCAG GCTCCCAAAG 000720 000721 TGCTGGGATT ACAGGCATGA GCCACCGCGC CCAGCCTGCC TTAATATTTT TACAGGGTAA AATAAAGTCG AAGTTAAAAT 000800 000801 CTGGAGCTGC CTTGGAGGAG AAAAGTTTAA GGAAAAGACA AGGCCACTCA TAGTTTTGCC TCGGAAAAGG TAGAATTTTG 000880 000881 GGGCCACTCC CTGAATGGCT GCATCCATAT CCAAAACAGA ACCACCAAAG TGAGCCACTT CCCCTGTTAT CTGTACTTGG 000960 000961 AGGTGGCTCC AATTCCAGAC TCCTCATAGA CTGGAAGAAA TTAGGGCCAT CTTAGACTAA GGCAGGCATA CACGTATCAT 001040 001041 CCTTTTTTTT TTTTTTTTGA GATGGAGTCT CACTCTATTG CCCAGGATGG AGTGCAGTGG CATGATCGCG GCTCACTGCA 001120 001121 ACCTCTGCCT CCCTGGTTCA AGCAATTATC CTGCCTCAGC CTCCCGAGTA GCTGGGATTC TGTGCAGCAA GTCCTCTGCC 001200 001201 CATAGGACTG GCAAAAGGAA AGGGGAAACT AGCACAGGTC ACTCCTTGGA AAGTAGAATC TTTGCAAGCT ACTCTCAGAA 001280 001281 GCCATCACAG TTGCAACAAC AGGGGAAATA AGCTATCGAA CAAGAGGAAG TGACTGGAAC CTAATGATAC TAATTCAGAA 001360 001361 GTCACAAGGC TGACTTGATG ATTAAAAGAT GAAAACTTGA GGCCAGCCCT ACTCTAGGAA AGTCCTCACT CCCGAAGAAA 001440 001441 GGAGACCTGA GCCACTAAGT AAGAAGTCCA GTTACCCTGT TGGATAAACC ACATGGAGAA GGAAAGGCCC TGAGATACTT 001520 001521 GGAGAGAGGG AAAAGTCCAG CTGCCCAGCA CCTGAGCTGA GCCCAGCCTC AGCCAACCCC ACCGGCTGAC TGCAAACACA 001600 001601 TCAGTGACCA CCAGTAAGAC CAGCAGAGCT GCACAGCCAA GCCCAGCCCA GATTGCAGAA TTGTGAGCAA ATAAAATGGA 001680 001681 TATTGCTTTA AGCCACAAAA TATTGAAATG TTTTTTAAAT GTAGAATGTG CATTCTAAGA ATAAAAAGTT GCAAAT |
Predicted Small Protein
Name | NONHSAT092654_smProtein_1061:1204 |
Length | 48 |
Molecular weight | 5319.9597 |
Aromaticity | 0.0851063829787 |
Instability index | 74.0765957447 |
Isoelectric point | 5.25189208984 |
Runs | 10 |
Runs residual | 0.0464893617021 |
Runs probability | 0.0247836071365 |
Amino acid sequence | MESHSIAQDGVQWHDRGSLQPLPPWFKQLSCLSLPSSWDSVQQVLCP |
Secondary structure | LLLLLLLLLLEEELLLLLLLLLLHHHHLLEELLLLLLHHHHHHEELL |
PRMN | - |
PiMo | - |