NONHSAT092970

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT092970

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1909 nt

Genomic location

chr3+:159706648..159713806

Exon number

4

Exons

159706648..159706961,159707954..159708099,159710799..159711631,159713191..159713806

Genome context

Sequence
000001 GGAGGCGGCG GGGCCGTCCC GGAACGGCTG CGGCCGGGCA CCCCGGGAGT TAATCCGAAA GCGCCGCAAG CCCCGCGGGC 000080
000081 CGGCCGCACC GCACGTGTCA CCGAGAAGCT GATGTAGAGA GAGACACAGA AGGAGACAGA AAGCAAGAGA CCAGAGTCCC 000160
000161 GGGAAAGTCC TGCCGCGCCT CGGGACAATT ATAAAAATGT GGCCCCCTGG GTCAGCCTCC CAGCCACCGC CCTCACCTGC 000240
000241 CGCGGCCACA GGTCTGCATC CAGCGGCTCG CCCTGTGTCC CTGCAGTGCC GGCTCAGCAT GTGTCCAGCG CGCAGCCTCC 000320
000321 TCCTTGTGGC TACCCTGGTC CTCCTGGACC ACCTCAGTTT GGCCAGAAAC CTCCCCGTGG CCACTCCAGA CCCAGGAATG 000400
000401 TTCCCATGCC TTCACCACTC CCAAAACCTG CTGAGGGCCG TCAGCAACAT GCTCCAGAAG GCCAGACAAA CTCTAGAATT 000480
000481 TTACCCTTGC ACTTCTGAAG AGATTGATCA TGAAGATATC ACAAAAGATA AAACCAGCAC AGTGGAGGCC TGTTTACCAT 000560
000561 TGGAATTAAC CAAGGTATAA AGGATTTTCC TCCCAGAGCA TGCAGTGTGG TTAAAAACTG TGCATCAAAT CTCACCTGCT 000640
000641 TCTAAAAATT CACGTTTCTG GTATCCATCA TTATGGGATT TTAACTGGTC CTACTTcaga agttagattt gggagaaaaa 000720
000721 ttatttttaa aaaatggttt tttttgcaac aatgtgaata cacttaacac ttaaaaatag ttcagatgct aaatattatg 000800
000801 atatgtgttt ttaccataat aaaaaaaaTT TGAGACCTGA AGAGTCAGAA AGATTTATAC TAAGAATTAA TACTTTGATA 000880
000881 TATGATTTTT TCCCTCTAGA ATGAGAGTTG CCTAAATTCC AGAGAGACCT CTTTCATAAC TGTAAGTCAA AAAATGAAAA 000960
000961 GTTTCAGCCT GTATGATGAA TTCATATCAC TGATGTCTGA TTATTTTTTC CTCTAGAATG GGAGTTGCCT GGCCTCCAGA 001040
001041 AAGACCTCTT TTATGATGGT AAGACACACA GCTCTTTCCT CAAATGCAAT GGGGGAAATG TTTTTAGCCC ATCTCAATGG 001120
001121 ATACTTCCCC ATCTTGTCAT GTCACCCAGG CCCTGTGCCT TAGTAGTATT TATGAAGACT TGAAGATGTA CCAGGTGGAG 001200
001201 TTCAAGACCA TGAATGCAAA GCTTCTGATG GATCCTAAGA GGCAGATCTT TCTAGATCAA AACATGCTGG CAGTTATTGA 001280
001281 TGAGCTGATG CAGGCCCTGA ATTTCAACAG TGAGACTGTG CCACAAAAAT CCTCCCTTGA AGAACCGGAT TTTTATAAAA 001360
001361 CTAAAATCAA GCTCTGCATA CTTCTTCATG CTTTCAGAAT TCGGGCAGTG ACTATTGATA GAGTGATGAG CTATCTGAAT 001440
001441 GCTTCCTAAA AAGCGAGGTC CCTCCAAACC GTTGTCATTT TTATAAAACT TTGAAATGAG GAAACTTTGA TAGGATGTGG 001520
001521 ATTAAGAACT AGGGAGGGGG AAAGAAGGAT GGGACTATTA CATCCACATG ATACCTCTGA TCAAGTATTT TTGACATTTA 001600
001601 CTGTGGATAA ATTGTTTTTA AGTTTTCATG AATGAATTGC TAAGAAGGGA AAATATCCAT CCTGAAGGTG TTTTTCATTC 001680
001681 ACTTTAATAG AAGGGCAAAT ATTTATAAGC TATTTCTGTA CCAAAGTGTT TGTGGAAACA AACATGTAAG CATAACttat 001760
001761 tttaaaatat ttatttatat aaCTTGGTAA TCATGAAAGC ATCTGAGCTA ACttatattt atttatgtta tatttattaa 001840
001841 attatttatC AAGTGTATTT GAAAAATATT TTTAAGTGTT CTAAAAATAA AAGTATTGAA TTAAAGTGA
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Predicted Small Protein

Name NONHSAT092970_smProtein_1052:1162
Length 37
Molecular weight 3927.62
Aromaticity 0.0833333333333
Instability index 45.2527777778
Isoelectric point 6.80413818359
Runs 7
Runs residual 0.013986013986
Runs probability 0.0247937012643
Amino acid sequence MMVRHTALSSNAMGEMFLAHLNGYFPILSCHPGPVP
Secondary structure LLEEELLLLHHHHHHHHHHHHHLLLLEELLLLLLLL
PRMN -
PiMo -