NONHSAT092996

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT092996

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4163 nt

Genomic location

chr3-:160212796..160217772

Exon number

2

Exons

160212796..160215639,160216454..160217772

Genome context

Sequence
000001 ACCATCAGTG CTTCAGTTTT CTCTCTATCC AAAGCAAGGT TTTAACTTTC CTTCATTCTC CAGTAAAACA GACCGAGACA 000080
000081 ACTTGAACTA TATTTTGAGT ATTGCTATAT CTTCAACATA TAGCTCCAAA TGATGGATTG TATACAAAGC ATAGTACAGA 000160
000161 AGGTTTCAGT AATTGGAAGG TGAACACAGC AATGCTTTAC ATAATTTGTG TTTTTTAGTA AAAAATATTG GATTCAAAGT 000240
000241 AAGCCAATGA GCTTGTATAC AAATTTTATA TACAAATTAT TGTATAGAAC AGTGATATGG AAAATAGGTA AGGGTGATAT 000320
000321 TAATATCTCT GGGTATAAGG ACTACCTTAT CGTTTAAATA TTTTATTTCC ATCTATAGCC TAATATAGAA CATTGATTTT 000400
000401 CTAGTAGAAA TTCTGGGAAG GGCTTTTCTG TCTCTGAAAT TGATTCAGTA CAGTTGACAG TTCATCACGG TTACCTGGTT 000480
000481 AAACACTTTT TTTTTTTTTT TAATTCTCCA GTGATCTAGG AAATTGTTTC ATTTTTAACA CAGGCTTATT TCTGATGGGG 000560
000561 ATGGGGGCAT AGAATAATAT GCCTAATAAG CTAAACGTTC TTAACGTTTC ATGTCTTAAA CTGTCTTTTT GAACATTGAG 000640
000641 ACCACCTCAA GTGCTGTAAA AATAAGAATG TTATATTAGG GGTGTGTGAG ACGCCCTAGT CTAAAATCTA TCTTTAAATA 000720
000721 TATTTCCTTT GTAATTTTCA AAGACTTCAG TAATTGTGTG TTATGGTGGA AATAATACTT TCCATTGGTC CACATTGCTC 000800
000801 TGGACCAAAC CTGGAGCATT TCTATAATTA GAGCTATCTA TGAATCATTA AAAATGGATC TAGAATAATT TTGGGGAGAG 000880
000881 GGAGTGTATC ATTTAGTTTA GGCTTACCTC AGCAGCACTT CATAGGGTGA GGAGTTGTTT GTTTCTTTAA AGGTATAACT 000960
000961 GCATTGTAAA ATGACTGGGT TTATTGTAAC AGTAATTTAT GGGGGCACCC TTTTTGGATT CTCCATTGCC TCAGTTTCCT 001040
001041 CAAGGAAAAA GTTACAGAGA TTAAGCTAAA TTTTGAATTT AGAGAATAAC TGCTGTGTAA TTTTGGTATA ATTACCATAA 001120
001121 ATTTAGTGTC TTAAAACACA ACATACATTA TTTCACAATT TCTGTAGGTC AAGAGTGTAG TTAGGTTTTC TGCTCAGGGT 001200
001201 CTCACAAGGC TGCAATAAAG GTGTCAGCCA GAGCTGCAGT CTTATCTGAA GCTAGGGGGT CCTCTTTTAT GCACATATGG 001280
001281 CAAAATCCAT TGCCTAGCAA CTGAAGAAAT CATGGGAACT GAACTATAAA TAGGCCAACT TTAATTGTTA ACTCCTCGGG 001360
001361 TTTGGTGGAT TATCTACCAT TTATATATAA AATTTCAGTT AGAATCCACC ATTGGCGTTT TGAAGGCCAA GATAGCTGAG 001440
001441 TATCTTATCC TTTTTGTAAC TTCTTGATTA TTTTACTTAT TGGCAAAATT CATTAACTGT CAGCCAATAA TTTAATATTA 001520
001521 TGGGAGGAAA AAATTTTGCC CAGATATCTG AGGCAATACT CCCAAACACT AACAAACTGA TGCCTAACAA ACTTGACATT 001600
001601 TTGAACACTT AAAGTTTTCC CTAAACTTTT TAATAAGCAC ATTAATAAAG TATGCTTTTA AATATATATG TACAATAATT 001680
001681 TTTAAAAGTT GCTGCAAGAT GCCTTCAAAT CAATATGCAC GTTGGTGGCA TTAGTGCAGT CTTCTATTTT TATTTTTTTG 001760
001761 AGACACAGTC TCGCTCTGTG GCCCAGGCTG GAGTGTAGTG GCGCAATCTC GGCTCACTGC AACCTCTGCC TCAAGGGTTC 001840
001841 AAGCAATTCT GCCTCAGCCT CCTGAGTAGC TGGGATTACA GGAGTACGCT ACCACGCCTG GCTAATTTTT GTATTTTTAG 001920
001921 TAGAAATGGG GTTTCACCGT ATTGGCCAGG CTGGTATTGG AATCCTGACC GCAAATGATC TGCCCACCTC GGCTTCCCAA 002000
002001 AGTGCTGGGA TTACAGGCGT GAGCCACTGC GCCCAACCAG CCTTAATTCT TAATAAAGGA AGTTGAAAAA TAATGAACAT 002080
002081 TGGTAAAACT ATTCTAGTGT GATCAGAAGC AAATTTGGAC TGTAGTGTCA AATTGATAAA AAACTAAGCA CACCAATCAT 002160
002161 GTATAAGAAA AGTAGATTTA ACATTTTTTT CCCTAAACAC TTAACCCAGA AGTTAACAAT AATCTTGAAA ATTCCTTTTA 002240
002241 AATCCAGGCC CTTTAGGTGA TGGCAGTTTG ACTCAGGATG TCCAAGTCCA GTGTATTTTC AATAAAATTG ACTTGACAGC 002320
002321 TACTGCTCTG GGTGTAAGAG CAGTTGACTG TGAGGAAAAG TAAATGGTTC TACAGATTCT TTATGATCTA CCTCCCACCA 002400
002401 GAGGACTGCA GTACTCCCTT GTTATTTATA TTTTCTGCCC CAATTTTTGC CTTCTCCACA AATTTTATAC CTTTTGTAGC 002480
002481 TGCCTACTCC AGATTACTTC ACCTTTCCAG ACTATCAGTT CTTCCACTTT TATTCTTCAT AAAGAAAATT CCAATAACCT 002560
002561 GTTTCACTTA GGTTTTTCTA TTACTCTTCA AGCATGAATC CTAATTTCCC TGACTATATC TTACCTCTGA TCTCCATAAC 002640
002641 TGATGGATTC CTATCCTAGA CTATGTTACT CTAATATTAC CCAAGATTTT CTCCAGCCTG TTTTTACTCT TACTTTGAAA 002720
002721 CAGCTGTTTA AAATGACTCG TAATCTGCTT AAATCTACAT GCTTTTTGTG GTTCTCAATC CAGTTACCTA CCTTCCAGAT 002800
002801 AATTCCCTCA CTGTCCTGTC CTCTCCATTC CTCTGATGTT TAAGCCCTGT GAGCCACCTT TCCCCCATCC TTTGTGCATA 002880
002881 GTTACCATTT TACTCTTTCT TGTTGCCCAG GCAGGAATGC AGTGGTGCCA TCTTGGCTCA CTGCAACCTC CACCTCCTAG 002960
002961 GTTCAAGCGA TTCTCCTGCC TCAGCCTCCT GAGTAGCTGG GACCACAAGC GTGCACCACC ACGCCCGGCT AATTTTTGTA 003040
003041 TTTTTAGTAG AGATGGGGTT TCACCACGTT GGCCAGGCTG GTCTCGAACT CCTGACCTCA GATGATCCAC CCTCCTTGGC 003120
003121 CTCCCAAAGT GCTGGGATTG CAGGCGTGAG CCACCGCCTG GCCACCATTT TACTCTTTTT AGGTACAGTA ATCTAATATC 003200
003201 CAAAGTCTTG GACTCAGCTA AAGAGGGTAT TTACCTTAAA AAAAAAAAAA AAAAGACTCC ATCTTTTGAT TCATAATTGT 003280
003281 GGTGGGGGCG GGGAATCAAG ACAACCTTAG TCACTTTGGT ATTACCATAA TTCTTGTCTT TTCAGGGTTG TCCTGTTCAG 003360
003361 CTGCATAAAA CATCATGTAT TCTAGGTATT TCCTACCTTC ACTTACATTT TTACTTGCCG ATGTGCTGCC TTCATAAATG 003440
003441 GGTATATTCC GCCACACATC TAGTAAGCCC CCAATGCAGT ACACAATGTG TATCACTGAT AAAACTCGCA CTTCTGCCAT 003520
003521 GTCAGTATTA TATTCAGTTG AGTGGTCTTT AGCATAGTGG CAGTCCTAGT CATCCTAACC TTTTAGTTAA GGTAAAATTA 003600
003601 CATATGTTTA TAGAACTCAT ATAGACAAGC TAGTTTTTAA AATCTTCCTT TTAACCAGTT TAGGATGATC TAGGATAGCT 003680
003681 AAGTTACCTA CATGGTGACT GTTCGGTCTA ATTCAGAAAC AGAAGTACTA AAAGAATACT AAAAAGTTTT TACCCATTAT 003760
003761 CTCTATCCCT GTTTTCTTTT TGCAATTCTC AGCTGCAGGG AGCAAGAAAA TACACAGCAG ATAGGAAATG TTTGTTTGCA 003840
003841 TCCTGGCTTT CTCAACCGCA CTTTACGTCC TTGAATATTC TAGATATTTA CTCCTTCAAG AAGTCAGGAG TATATCCAGG 003920
003921 CCTACCTATC ATCCTTGCCA TCCCCATTAA CCCTCATTTT TCAGTATGTG TTTTACATTT ATGGTTATTT TTCAGTCTAT 004000
004001 AGTATCTGTT CACTCATTGC TCTATCACAT CTGAGTTTCT CCGTCTTTCT TTCCACTAGA TTGTAAGCTC CTTAAGGGCA 004080
004081 AGGTCGGCAT ATAAGCAAAG TTCTGTAAAC ACCGTGAAGG TACCATGAGT TCTATGGGTA CTCAATAAAT GCTTGTGATA 004160
004161 ATG
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Predicted Small Protein

Name NONHSAT092996_smProtein_2363:2596
Length 78
Molecular weight 8895.3692
Aromaticity 0.155844155844
Instability index 73.2871428571
Isoelectric point 7.70257568359
Runs 15
Runs residual 0.0587238848108
Runs probability 0.0386857445681
Amino acid sequence MVLQILYDLPPTRGLQYSLVIYIFCPNFCLLHKFYTFCSCLLQITSPFQTISSSTFILHK
ENSNNLFHLGFSITLQA
Secondary structure LEEEEEELLLLLLLEEEEEEEEEELLLLHHHHHHHHHHHHHHHHLLLLEEEELLEEEEEE
LLLLLEEELLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLL
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