NONHSAT093004

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT093004

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4262 nt

Genomic location

chr3+:160792441..160796690

Exon number

1

Exons

160792441..160796690

Genome context

Sequence
000001 TCTGTTTGTT ATTTTTACCA CTGTTGAACA GCAAACTGTT GAGGCTAGGG TTGATTATTG ATAATTTTTA TGTGTTTAGT 000080
000081 AATAACCACA GCATCATACG TACAACTGCT TTAATAAATC AAAGTTAAGG ACTTTGAGGA GAGCATGTAG CAAGTATTCA 000160
000161 TTTTAACAAA TAATCACAGA CAGTTTCCCT GTTCAAAGCT CCACCAAAAA GCAAGCATGC AGCAAAGGCA TAGACTGTAT 000240
000241 TTAGAGATGT GGTTTCATTT ATTCTTGAAG TCCTATAACC TTGCATTATT TAAACACAAA ATCCCACCTA ACATTTGCCA 000320
000321 AATCCAAGTT AATCTCAAAA ACCTCCGAGG ACATTGAGCA CAAGCAGATT ACTGTAAGGG CACTGGTGGC AGATTGTGGT 000400
000401 GGAGAGAGGG CTGAGTGACC CAGAGCAAAG CCTGCCCGGG TTACTCGCTG CCACTTCAGG AGAGGGATTG TATCAGCTCT 000480
000481 CATTACCTTT TGTCATGAGG CAGTTCATAA ATTAAATATG ATATCATGCA TTATCTCAAA ATATTTCTAT ATTAATTAGA 000560
000561 TAATTCACGA TGTAAAACGT GTTCATGCAG AAGCAAAGGC GGATGTAATA GTCAAGTATC AGGGAAAAAC CCCTTTAGGA 000640
000641 TACACAGACA TTAAAAATGT AAAAAGTAGC TTATAAGAAA TGTGGATTAT CAGATTTTTA CTATATATAG GTTGTGTTTA 000720
000721 ATAGTAATTT CTGACACCTG CACATAGATG AAGAAAAGGC AGTTGTTACC ACTTTTCACC ATTCAAAAAA TGGGCTTGTC 000800
000801 TCTTAGAGTA TTGGTTAATG CTTTGCTTAT TTGTTAATGA AGACAGCATT TTAATTTTAA AGCTTCCTTT TGTAGGACTG 000880
000881 ATGGCACGGG CAGAATCACA TTTAAGAAAA ATGGTTTGGA ACACTTTTTA ATAAAAAATT GTAAAATCAG TTTCCAGTGT 000960
000961 GGTCAAAATT AGAATGTAAA GGAAAGCATT TTTAAGAAAA TACAGAAGCC CAAATCAAGG GAGAGTAATA TAAAAGGAAA 001040
001041 TATTTTAAAT TAAGAAAAGG AGGTGTTATA GTTTATTACA TCATGAATTA TGCTTTCTGT ACTTACGCTC TTAGTGAAGG 001120
001121 AGATAACATT GAAGTGAGAA AATGAACATT CTCAGTTATT TGCGAAGTTA GTAAAATTGC AGTCCCTATT CCATTTTTTT 001200
001201 CTGATGAAAA TGGATACATG AGATCTCATT TATTGCTCTC CTCAACACCT TTACTGTCCC AGATTCCATT CACGTTCCAA 001280
001281 ATCGTGGACA GTAAAACTGA AGTCAGGTAA ACACAGTCAC AGGTACAACT GGGAGCAAGT TTTAACATAG TGGTAATTTT 001360
001361 GCAAATGCCA ACATGAATAC TAGTGAGTAC TCAATTTACG ACAGACAATT TCACAAAAAC CAACCACAGA GTGATTTGAT 001440
001441 ATTCTTGCTT CTTAGAGAGT TTTCTAATCC ATATAATGCA ATGGGTCAGG TTGCTCATAT GATTAAAAAA ATTAATCCTG 001520
001521 TAGAAATGAT GTATTAGACA TCTCTAACCC AAGAAAAAGA TGTCTTTTGT ATAACTTTTA AATTCCCATT TGTCTATCTT 001600
001601 AGGACAAATG ATGACTTCTT CGTGTAGTAA TGAAAACGTC TAAATCCTGC TCTGTGGAGA AAAGCTAGAA CCATGGGACA 001680
001681 TTAAGCAAGA ATACTCCTCT GATTTAGGCT CCCAGACTAC AACTAACAGT CTTTATGTAT TTATCATCTT GGTTATTGTT 001760
001761 TTATCTCAAG CATATACAGT GTGCAGAAAG TAGAATAATG AATAAAATAT GACCATGGAG AAAACCCATA ACTTTTGCTT 001840
001841 CTATTATAGA AAGCAGTGTT TGTTCCTTTT AATTTATTAC ATGTTCACAT TGAAACATTA ACATCTACAA TATTGTCTTT 001920
001921 CAGTTTACTC TTCAATTACT AAAGCAAATG ATTTTGATTT ATAGCACTTA CACAACTGCA GTTCAGGTCA CAGAATTGAA 002000
002001 ATCTATTTGA TAATGTCTCA GCATTCTCAT GGGCAGCCAG GAAAAAAAAA AGAGAGAGAA AGACAAATAG AAATTTTAGT 002080
002081 GGGTTCAGAT AAATGATTAT TCTGACAAAC CTGGAAAATA GTAATTAAAC AGTTCATTCC AAAAGACCCC AATGTAAACT 002160
002161 CTGCTCACAT ACATAATTTG TATAAGGAAA ATGTATGAGT TTTTTTCTTA AAAATAAATA GAAGCATCAT TGCATTTATA 002240
002241 ACAGATTGAT CAATCTTATG AACAGATTAC ATTGGGAAAG TCACTATTAT TGCTGTGTGT TTGTATATTT TATTCTTTCC 002320
002321 TTTTTTGTGT GAGCATCTAC TATGTGCCAG GCAGTGACTG TGTCTGAGTG AATGTATCCA TGGTGAGCAC TCAGGCGCCA 002400
002401 TCACTGCCTT CTTGGGGCTT ACACCCTATT GGGGTGTCAG AGATATTATA ACACTCAATA TTGACCCAAT GGGATGAAAA 002480
002481 TTGTTATCTT CATGATTTCT TCCAATGGGC TTAGATTTGT TGGGACAGGG CAGAATTAGA ATAATTATTT CTCACATATA 002560
002561 AGAGTAAGTG ATATGAGATT GGGAATTTCT TGCCAACACT CAAGCAAACT GCAGAAGATA ATTACTCCAT TTTACTAGCT 002640
002641 CACCTAGTTT CTGAAGGATG GGGTGGGGAG TGAGACATGG AGCCTCTGGG GACAAGGATA GGGGGGTGGG ACTGTCCCAG 002720
002721 TGGAGGGTGC CACTGGAAGC CTCCACCCAA GTGGGCCAGC AGCTGTGCAA GGGTGCAGCA GTAGGCTGGT GAAAGCCAGG 002800
002801 TTGTCCAGAT CTTTCTAGGG GAAGAGAAGG ATTATAGAAA AGGAGAAAAG GGAGGAGCAA GAACATCTCT CCATGGCCTA 002880
002881 TTTTTATTTT TGTTCCCAAG AGACTAGTGT AATAACCTTA TGCCCCCAAA GACAGCCCAG AACTGAGTAT CTTCAGTGTT 002960
002961 CCTGAGTGTA AATCAGTGAA TCTGTTATAT AGAAAGTTAA CATTTCAGGA GCACAATTAT TTCCTGATTT CAAATATGAA 003040
003041 CAGAAGACTA AATGTCATTT TTTTAAATCA TAAATTTGGT ATCCATAGTT ACTTTACACA TTCCAGAGTC TAAGCATGGA 003120
003121 ATTTAAGTTT TGTATTTTGA ACAAAAATAG CAACATCTGT TTTCTGTATG GCAAAGAAAA ACTAAATCCC AGACTTTTAT 003200
003201 TTTTAACCAC AGAAACCATC ACTTCTTTCT AAATTATTTG CTTGCCTGCT CATTTCCCCT AAACATCTCT GTTTATGCCA 003280
003281 ATGGCTTTTT AAATCCAAAT AATACTAGTT ATTGCCAAAT TGCATTAGAA TCCTATTGAA TTAGAATAAT TCATATACTT 003360
003361 CATATACTAG GCAGTAAATG GTTAGAGACG GTAAAGATCT GATTGTGATC AAAAGTAGGG TTTTTGTTTT GTTTTTAATC 003440
003441 ATGAGCACAT ATAAAAGGAA ATTCAAATGA AACCAAGCCA ATTTCTGATT TAGTAAGATT AAAACCATAG ATGGAGCTCA 003520
003521 GTTATTAAGG ATGGAAAGGA GGAAAGCACA GAGTGAGGAG AGAAAAAGGG GAAGGAAAAA AAGTAGTGTT TTTTTGGGGA 003600
003601 ACAGTATAAT GTCTCAGAAG TTCTTCTCTC TTATCCTGCT GATGTTGAGA CAGTGGCTTT GTATAAGCTT TTATTTATAC 003680
003681 CTATTTCAAC ATCATGAAAA TTTTTCCATC AGCATTTTCT TGCAACTTTA AAAATCACAA GGGATTATTT GTTTATAAAG 003760
003761 AGATACAGGA TCTATAATTT ATTGGCAATA CTTTATTTTA GGAATCTTCA AATTGTACTT AATAAATAAA TCACAGGTCA 003840
003841 AAATGACTGT AAAATCAATC AGGCTTTCTC GTAAGTTATT TCCTGAAAAC CATCCATGAT AAATACAACA AGGCTTGGCG 003920
003921 AAACCTCATT ACTCTTGGAA GTCTTCAGAG GTTATTATAC CTACTGATCT GTATTTGTCT CTAAGAGACA TTTGAAACAC 004000
004001 AGTTACAATG TCAATTTGGT GTAACATTAC CTGTAGTAGA GCTCAGAGTA TATGGCAGTG CACGGTCACT CAAGATGCAT 004080
004081 GGCGTGTCAT TTGGGTCGCT TTGATGGGTG CTCGGGTAGA ACTAGCCTTG TAGAGACTAA TGTGTTCATG CTATCTCTGA 004160
004161 TCCTGTGGTG TTGTATAAAA ATGAACAGCT AAAAATTTAC CCATGACAAG ATTAAAGCAA AAATAAACAC AAAGTTGTTA 004240
004241 GACTTTAAAA AAAAAAAAAA AA
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Predicted Small Protein

Name NONHSAT093004_smProtein_3530:3730
Length 67
Molecular weight 8060.4518
Aromaticity 0.151515151515
Instability index 66.1289393939
Isoelectric point 10.3692016602
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0321203556497
Amino acid sequence MERRKAQSEERKRGRKKSSVFLGNSIMSQKFFSLILLMLRQWLCISFYLYLFQHHENFSI
SIFLQL
Secondary structure LLHHHHHHHHHHLLLLLLLEEELLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLE
EEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL
LLLLLL
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