NONHSAT093069
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT093069 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
8441 nt |
Genomic location |
chr3+:165178150..165257210 |
Exon number |
8 |
Exons |
165178150..165178420,165208984..165209054,165213009..165216707,165216909..165217909,165229299..165229439,165231455..165234150,165239548..165239751,165256853..165257210 |
Genome context |
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Sequence |
000001 AAAATGCTGA CCTTTTCATG AGTAAGGGGG GAAGTCCTCC TGCCTGACTA CCTTTGAACT GGGACATGTG CCTTTTTTTT 000080
000081 CTGCCTTCAG ACTCAAACTA AACGTCAGCT TTTCCCGGCT CTCAAGCCTG CTGGTCCCTG AACTAAAACT CACATTATCA 000160 000161 ACTCTACTGG TTCTTAGGCC TTTGGAGTCA GACTGGAACT ACAGCATTGA CTCTTCCGGA ACTCCAGCTT ACTGACTACA 000240 000241 GATCTTGGAA CTTTTCAGCT TCCACAACCA TAATGAAAGC CAAGCATATT CCATCATTTC CTAAAACCAA GATAGAGCAC 000320 000321 ATATGGGAAC TTGTGAAATA AGGATGCCCT GCGGTTGTTT TCAGGACTGA AGACAACAGC TCCACGATGT ATCTTTGCAT 000400 000401 AAGAATACAC TTGTATAATA AGTTTTTTTT TTTAGAGAAA TTGCATGTAT CTGCCTTATA AACTTTTTCA TTCATTCATT 000480 000481 TTCTTTCTTC CTAATCTGTT CCATAAAGCA AATTTCTAAC TTATTGTTAA TCAAAATAAT TATTGAAATA ATTAGTACTT 000560 000561 TCATATGATA AAGATTATTT TAATCTGCAG CTACAAAATA TGTAACTCAT TAATATTTAA ACAATCACAA TTTTCTATTA 000640 000641 ACATTATAGC ATTTTATCTA CTACTAGATC AGGAATTAGC TATTTTTTGT AAAATTTCTT TGTAAGGCAA AGCAATAGTA 000720 000721 TTGTATATAC TTTCCTAAAG ATTGTCAAGT TCAGTTTTGC TTAAATTTAA CAGTACATGT GACACTTTCT GTTTGAAGAA 000800 000801 TAAGTTGGTT TTAAGTTTAT ACCAAACAAA AGCATCTCTT TTGTTTTGCA AAATCTGAAA CTTTGATCTT TCTAGTTGTG 000880 000881 ACTTCTTGTA AATATGTTTT ATATAAATAT TCTATGAATT GGTTATTAAC AAGGTAAAGA AAGATTGATA TGTAAGCTGA 000960 000961 TTCTTAAACA TTAATTTTCT GGAGATAAAC TTTTTTAAAA TTATGCTTTA AAAATATTTT AACACATGTT ATCAAAAAGG 001040 001041 AACTGAAATA TCTTAGGCAT AAAAGACATC TCTAGAGGTC ATTATTCAGT TTCCAGAAAG TACTGAAACT ATCTCTGACA 001120 001121 GATTGATACG TTTTCTGCAT TTATAGCTCT CTGGAGAGAG GTTCTGTATA TTTAACAATT CTCACTGTGA GGGATATTTT 001200 001201 AAGTATTTCA AATTTAAAGT GCTCATGTTT CAGATTCAGA TTATTATTAT CATCATCATT ATTTTGGTTC TGGCTTCAGT 001280 001281 AAAAATGTGA AAAACACTTT TCCATCTTCT GATAATATTT CATATTTATA AAATTATTAT TAAGTTATAA CTCAGCTTTT 001360 001361 TCATTTATGC TTTAAATCCT TTTATTATCT CATCACAACC ATCTTTGACT GTTTATCAGA AATGGTTCTC TTTTGTACAT 001440 001441 TGACCATTAT TTTATAGATC ACATTTAAGT TAATATAAAT CATGCCTATA AATTTCAGCC TGCTTATTTT TTATAATCTA 001520 001521 GTCAGATATC AGCTAGACAT ATTGTTACCA AGTTTGGAGA GCCTTGGGAT AAGCTAGTTT CAAAACTGGC TGTTAGCATC 001600 001601 CCTCAGTTGT GTTTTGGGAG CAAAGGACAC CCTTAAAAAA GGGAGGCAGT TATATTTTGT GAGCATTATA AAATAAACTT 001680 001681 AAATTCTCAT AAAATTAGTG AATATGTTTG GAACAGTGTG AATTACGTGT GTGCTACATG AAGTATATAG AATTCATTTG 001760 001761 AAGTAGGAAG TCTGGCCTTA CCTCAAAAGA CAGTCATTCA ATTAAGCAGT TAAACATAAG CCACCATAAG AAGTTTTTTT 001840 001841 GATACTTAGA GAGAGAAAGG CAACGTGTAT TAAAATTCCG GGACCATTAT CTCAGGAGTG CTGTGTTATT ATTGACTGGG 001920 001921 GGCCTGCTGG GAAGCTAGAA ATATATCTAA AATGTGGCAG GTGGTTAATT AGAGCATATG AATAAATATA TATAAATTTG 002000 002001 TTAAAGCGTT CACTTATGGT AAACTATACC TCAATTAAAA AGAAAAAATA TGCACAAAGA AAATAAATAA TGAATGGAAA 002080 002081 TATGAGCCTC TAAAATCAAA GTTAGAAAAG CAGATATTCA AATTTGCAGA GCTGATTGTC AACTGGAATG ATTGTGATAG 002160 002161 AATCAAGTCT CACTAGCTCA TTGGAAATAG GATTTGTTAA GGTAATGATG GTTAATGATT TTTCAGCATA ATAACAGCCA 002240 002241 AGTTAATGTA TGGGTGCGTG TGTGTATCCA TAGGTGTATG TTTTTACATG CGTATTTTTA TTGTAAAATT AACATGTTTA 002320 002321 TTGAAAACAA GAAAGCACAG AAAATATCAA CTTAAGTAAA GATCAACATA ATTTAGTTCA AAATTATATT CAACAGTGCA 002400 002401 TTATTTCAAT GTTTTTTATC TTAATCCATT TGCTTGAAAG CATTGATATA TGCTCCAAAT TTCCTCCCAG ATTCCACTTG 002480 002481 GGGAAATATT TAGTATATTG GATTATGAAA TGATTTATCT TTACCTATAT TATTAGTAAA GTTCTTAAAA TTTTTAGCCT 002560 002561 GTTACTGTCT ATGTGATTAG TGATATTGTT CACATGACTA AAATTCAAAG ATAAAATATG ATTATATTTT ATGGGTGAAA 002640 002641 GTTAGGAAGC AAAATAGCAT ATTAATACAT TTAACTAAAG TAGTATTCAT TTGGATAATC AAGGTCAAAC ACTTCAAAAA 002720 002721 TAATAATTTT AAAGTTAATG CTTTCAAAAA ATAAATTAGC AAAAATTATT TACTTTGTTT CTTAAAAAGA AGAATTATTG 002800 002801 AAAAAAATTC TACCATCAAA AAATAGTTGT TCTATGCCTA GTTTATTTTA GTCACTGAAT AAGACTGAGC CCTTGACCTC 002880 002881 ATATTTTTTC CTGCCTCACC ATTAGCAGTT AGGTTTAGCT ATGCAAACCT TTATTTATTC AACATATATA AAATACTTAG 002960 002961 TATGCAGTAG ATGTTATTCT AAGTGCTTGG TAGATATCAA CACATTTAAT AATCAAAACA ACTCTAAGAG GTAATTAGTA 003040 003041 CTATTATCTC CATTTTATTA CTGAGGAAAC CAAAGCACAA AGAGAGAAAG AAAAGAAAGA GAAAAAAGGA AGAAAGAAAA 003120 003121 GAAAGATGAA AGAAAGAAAG AGAAAGAAGA GAGAGGGAGA GAGAGAAAGA AAGAGAAGGA AAGAAAGAAG GAAGAAGAAA 003200 003201 GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAAA AGGAAGGAAG 003280 003281 GAAAAGAAAC ACATGGAAAG TGGTATGTAG ACCTGCCATT TCAATCTATA CCTTCTGCCT CTGTGCTTCT ATACCTCCTG 003360 003361 AGTTTAATAT ATACTTCTTT ATTTAAACAG TTTTAATATA TAAATGCTAA TTTTTCTATG ATATAATTTT ATAATAAATA 003440 003441 AATAAAATTA GCTTGCTATC AAAATATCCC AGTTCATAAT TTTATAACTT CACCTCTAGA CCATGAGTAA CCCTCAACCT 003520 003521 ACCATCTCCT CTTTTTGGAC ATCTTTGGTA TTTGTATCCC TGTTTCTTGG TCTCTAAATA TCTCTTCTTT TATTCATGTG 003600 003601 TTACCTTTCC TAATGACAGA ACCCTTTTCT TAAAAAAAGA ATTATGAGTT AGTGTAATGT ATAAATAGAG ACATTAGATG 003680 003681 AAGGACAAAA TAATATTCTC CAAAAAGTTA TTTGAGGTGG CTTAGTGAAG TTGAAAAAGC ATAGTCTTTG GTATCACATA 003760 003761 GACATAAATG TACCTTTGGG CAAATCTATA AACCTCCCTA AACCAGCTTT TACAAACAAA ATTGTGTTCA TTATAGGAAT 003840 003841 TAAAGGTATC AATTTCACAA AATCACGGGC AGTAAATTGA TAGACCTCAG AACCTAAGGC ACGGGTCTGA GGAAACGAAA 003920 003921 GCACAAAGAA ACAGAGAGAG AGAGGGAGAG AGACGAAGGA AAAAGAAAGA ACCAAAGAAG GAAAGGAAAG GAAAGGAAAG 004000 004001 GAAAGGAAAG GAAAGGAAAG GAAAGGAAAG GAAAGGAAAG GACAGGCTCC CTTTGTATAT CACCTTGCAT GGTAAAGTGC 004080 004081 AGAGAGCTCC ATCAGAGAAA TGCAGTTAAA ATCCAGTAGA TACCACCGTA CACCTGAAAG ACTTGTGAAC AAACAGATGA 004160 004161 CAGAAAAACA AAACAAAGCA AAACAGAACC TGAGAATTTG AATTGCTGGT GAGGATATTG AGCAAGTGGA ATTCCTATAC 004240 004241 TTTGCTGGAG GGAATGGAAA ATAGTACAGG CAATTTGGAA AAGAGTTAGA CTGTTGTATA TAAAATTAAA TACATACTTA 004320 004321 CCTTACAAAG TAGGAATCTC ATTCCTAGAT GTCTTCCTAA GAAAATTGCA AACTTTATGT TCAAACAAAA ACGAATGTAA 004400 004401 ACATTCACCT ACAGGTGAAT GGATAAATAC ATTGAGATAA ATCTATGCAA TAATACATAT TACTCAACAA TGAAAAGGAA 004480 004481 TTCACTACTG ATATGTGAAA CATGGTAGAC TGAGTAATGC CTTCCCTTCT TTCCAAAGAT GTCCATGTCC TAATCCCTAG 004560 004561 AACCTGTGAT GTTACTTTAT CTGGAAAATT AAACTTTGTA GATGTGATTA AATTAATGAT TTTTAGCTGG GTACATCATC 004640 004641 TTGGATTATC TGGTGGGCCT GATGTAATCA CAGGGGTTCT TATAAGAGGG AGGCAGGAAA TCAGAGAGAG GAAAAAAGGT 004720 004721 GTGGAGAAAT ATGTGACAAC AGAAACAATG ATAAAATGAT TAAAATGACA CAAACAGGAG CCAAGGAATG CTATAAGCAT 004800 004801 CTGAAATCTG AAGGCAGCAG GTAATGGATA CTCCCCTGGA GCCTGTAGAA GAAACCAGCC TCCTGACACC TTGATTTCAG 004880 004881 CAAAAGTATT TTAAATTTCT CACCTAGAAG TGTAAAAAAA TATATAAATA AATTTGTGTT GTTTTATGCC AGTAATTTTG 004960 004961 TGATATTTTG TTACGACAAC AATAGGAAAT TAATATACCC AGCAATGCAG ATGAATCTCC AAAGCATCAT GCTAAGTGAA 005040 005041 AGCTTCTTTG GACCTTTTAA GTTGCATTAT CCCATAAAAT GTGGTGGATT CAATGTTGTA TGGCCTGTAA AACTAAGTAA 005120 005121 TGAAGGCTGA TATGTACCCA CCTGGCTCTG TCTTGGGATC ACACAACTTG GGAGCCAAAA CAGATTGCAA ATGATGTTCA 005200 005201 AATCAAGGAC TGGCTTAAGG GAGAAAATCA ATTATACTGT ACAACTCACA CTTAAGACCT CAGAGAGATC TAAGATGATT 005280 005281 CTTTATATAA TTTTTAAAAC AATCACCCCT CTAAGGAGCA TAACAATGTG TTTTAAATGT CCTCCCCATT ATACAGTGAG 005360 005361 ACTTATAAGA ATCTCAAGGA TGGTGTCCCA AGGCAAACTC ATGGCAAGAT CAAGAAAGAG AATGGCCTGT CTTGACAAGA 005440 005441 TTTGTGGTTT TGGCTTTCGT CTGATGGAAT GAATTGTACA CAAATACACA GAAATCCCAC AAATATTAAA ATAATTGTAT 005520 005521 CAACTTGTAA GAAAAAGGGA AAGAAATAGC TTAAAATGGA ATATTGCTAA GCCCTCAAAC CTTTACAAGC AGGAAATAGG 005600 005601 TGTAAACAGG CTTAGGAAAA TGGAAGGTGG ACTCAGGGCA GATTGAGGAG ATCTTGGAGT GCAGCAAAGA GCCATAGAGA 005680 005681 GCAATTTCCA GGGAGTAGGA CTGAACTCTA ACCAAATAAT TGGCAGCATG TGCCTGGCAT TTCAGGATTG ACATGGACCG 005760 005761 GTGACTACTG TGTTCCTTCC CATTCCCCAC CCTTTTGTGT AGGATTGTCT GTAGCAGTTT CCCAATGCCT GTTCCTCCAC 005840 005841 TTGACGTTGG GTATTTGGAG AACAAGAAAA ATTCTCTTTT TAGGTCAGAT GTGTGACATG TATCACATTG TAAAAAAGAG 005920 005921 TGCTCAATGA GCTGTATTTC AGGAATTGCA CTTAAGGGGA ATTATTTTTA CCTATATTGG ATTAATATGA TAAGATTTTG 006000 006001 AACTTTGAGC TTATGTAATT ATGAAGTGAG ACCTTTAGTC TTGGGGAATG ACTGTATTTT ATATGCGAGA GGTATATAAA 006080 006081 TCACTGTGGC CTGAAGATAG ACTGTGGCAG ATTGTATTTT TCAAAGATTT CCTGTCACAC TTTTTTTTTA TTCTTTATTT 006160 006161 TTCTCTTTCT TTCTCTTTCC TCTTTCTCTT TCCCTTCCTC CCTTCCTTCC TTCTTTCCTT CCTTCCTTCC TTCCTTCCTT 006240 006241 CCTTCCTTCC TTCCTTCCTT CCTTCTTTTC TTTCTTTCTT TCTGAGAGGG TCTCACTCTG TTTCCTGGCT AGAGTGGTGT 006320 006321 CACATTCATA GCTCACTGTA GCTCAAACTC CTGAGTGCAA ACAATCCTCC TACATCAGCC TCCCAAGTAG CTTGGACCAC 006400 006401 AGGTGTGCAT CCACTCCTGG CTAATTTTTT AATTTTAATT TTTGTAGAGA CGGGGTCTCA CTTTGTTGCT CAGACTGATC 006480 006481 TTGAATTCCT GGCTTCAAGA GATCCTGCTG CCTCAACCTC TAAACTTGCT GGGATTGCAG GTGTGAACCA CCATGCCCAG 006560 006561 CTACTTTCTT TTTCTTACAA TATGCCTTTG ATGCTCTTCC CATCAAGAGG TATTCCTTTC CCTTGAATAT GGGCAAGGCT 006640 006641 GTGATTATTA ATGCTATATG ACTTTTGAGA GTAGGTCATG AAGCATGATA CATTTTCCTA GTTCATTTAG GATGCTTGCT 006720 006721 CTTAATACCT AGCCCCTATG CTTGTATAAG TCCAAGAGAC CTGTTGTGGG GAGGCTCACA TGAAGAAGAA CGCAGGCACC 006800 006801 TAGCCTACAG TCTGATTGAG CTCTCATCTG ATAACCCATA AGAACTTGAG AGCCTTGTGA GTAAACCATC TTGAATCTTT 006880 006881 CAGGACCCAG TTGAAACACT TCAGCTGATG CTGCATGGAT CATTGCGGAT TTGTGAGCAA AATAAATTAA TATAGCTTTT 006960 006961 TGTTTTAATT AAACAATATT TTTTGAGACA AGATCTCATT TTGTCACCCA GGTGGGAGTA CAGTGGCACA TTCACAGATC 007040 007041 ACTGTAGCCT CAAATTCCTA AGCACAGGAG GTCCTCCCAC CTCAGCCTCC CCAGTAGCTG AGACCACAGC ATGTGCCACT 007120 007121 GTGTCTGGCT AATTTTTTAT TTTTTTGTAG AAACGGAGTC TTGCTATGTT GCCCAGGCTG GCCTCATGTG ATCCACTTGC 007200 007201 CTCAGTCTTC CAAATTGTTG GGATTACAAG TGTGAGGCAC TGCACTGAGC CCAATATTCC TTTTTAAGCT ACTAAGTTTT 007280 007281 GGACTGATTT GCTTCCCAGC AGTATACGAT TGATAAAACA CAGAATATAG AATAAAATTA ATCTCTTATG TTGTCCTATG 007360 007361 AGGCTTTGTG AGATTTAGTT TCTACCAACA CCCCAAAGTC ATGTCATACC ATTTTTCACT GTGCTTACTT TGCTTCACTG 007440 007441 ACTTTTCTCC TGTTTTCTAA AACTAGCTAG TTCTTATCTT CAGGCTTTGT CATTGTCATT CCCTGCTGAG AATATTGTCT 007520 007521 GTCCAAATCT TGTAATTCAG ACTCAAAAAT AGTCTGTGGC CACTCAATCT AAAGTAACCC ACCACAAACT CTAGCCCATC 007600 007601 TCCCTATTTA TTTTCATCAT GATATTTATA TCTATCTCAT CTAAATTTTA TCTATTTGTC ATCTATCTAA TTGAAATTTC 007680 007681 ATGTTTCTTT ACTACTAATA CGCAAGCTCT GTTAAGACAG AAGTATTTAG TTTAATTAGA TCCCATTTGT CAATTTTGGT 007760 007761 TTTTGTTGCC ATTGCTCTTG GTGTTTTAGA CATGAAGTCT TTGCCCATGC CTATGTTCTG AATGGTATTG CCTAGGTTTT 007840 007841 TGTCTAGGAT TTTTATGGTT TTAGGTCTAA CATTTAAGTG TATAATTGTG ATCTCTTCCC AGGAAAAAGG TAATGATCCT 007920 007921 GGAACAAGAT ATATATGCCT GGTATATATT TATTATCTTA CAATTGAGCT TTCATTACCA ATAAGAGTTC TCTTACCTTG 008000 008001 AGTCCTCACC CTGTGCTAAG CTCTTGCAAA ACACATCCCA GATTTTATCT CATTTAATCC TGGCAACAGT GGTACAAGGC 008080 008081 AAAGTGAGGA TGGGGAGGTG TCAAACAAGA CCTAACCTCT CAACAATCAG CTGGACACTG TTGTGTAAGA ATGTGAAGCT 008160 008161 TGGCACTGCT GCAGCCATCT TGTTCCAGGA AGGGTAAAAC CTGAGGTTAG AAGCCAACAT CCTAATGATG GCAGAGAAGA 008240 008241 CAAAGAGAAC CAGAGTCTAA ATGACATTGT TGAGTTAGAT CACTACACTA CCTCTAGTCT TCTTTTTATG TGTGATAATA 008320 008321 AATCTCACTT ATACTTAAGC CATTTGAAGT TGAGTCTAAT GTTCATTTCA GACCAAAGCA GCTTAACTGA CATGTTCTCC 008400 008401 GCTTTGTTAC CCTATCCAGT TGTTTTCATG CAGGAAATAA A |
Predicted Small Protein
Name | NONHSAT093069_smProtein_6047:6340 |
Length | 98 |
Molecular weight | 11818.7734 |
Aromaticity | 0.288659793814 |
Instability index | 57.3413402062 |
Isoelectric point | 6.89251708984 |
Runs | 16 |
Runs residual | 0.0334096983582 |
Runs probability | 0.0289867072955 |
Amino acid sequence | MTVFYMREVYKSLWPEDRLWQIVFFKDFLSHFFFILYFSLSFSFLFLFPFLPSFLLSFLP SFLPSFLPSFLPSFLSFFLRGSHSVSWLEWCHIHSSL |
Secondary structure | LEEEEHHHHHHHLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHH HHLHHHLHHHLHHHHHHHHHLLLLHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHH HHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTooooTTTTTT TTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii |