NONHSAT093159
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT093159 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1277 nt |
Genomic location |
chr3+:169512750..169514001 |
Exon number |
1 |
Exons |
169512750..169514001 |
Genome context |
|
Sequence |
000001 CCAGCGTCCG CTCTATGTTT TATTACTCTT TTTAGTGGTG GAATTTTTGT TAGTCCTTTT GCAAATTTTG AGAATTTTAA 000080
000081 CATCTACTTT TTCCCCCTCG TTCTTTCCAA ATGAAAACTG TTACCATTAT TTCTGTTTTG AAAGTAGTAT CAAAGGCTGT 000160 000161 CTGTATTTAT GTGAGCAACA TGCCAAATAT TTTGATAGCT TGTACTCTAT CTCTCCCATT CCATATTTTG GTATAATTAT 000240 000241 TAGGGAGCAG ATCAGAAATT TTGCTACATC TGATCAATAA TTATGATTTT TCTTAACCTT AGAGGAATTA GAACTGTGTC 000320 000321 ATTCAGTGAT GTGTAATACT AATACATAGT TTTAATATCT TTGGTTATTT GAACCACCAA ACTCTCTAGT AGTTAATTTT 000400 000401 AAGACTTATG TTAATTATCA AAACTGCAGT GTCTCACTGT GTAACCATTT CTGAGGCACC TGTAAATAAT ATCTGATGTT 000480 000481 ACAGAGATGA TCCCAGAAAA AGCCTTCAGT GAAGGAAAAA ACTTAAAACT TACTATACAC GTAGCCTCAT CAAATTTGTT 000560 000561 TCCCCAAATG TAGATATGAG AGAAAGTGAG ATTTGTTTTC ATTGATTGTG AAAGTGCAAC AAGTCCTTCT CCCTCTATGT 000640 000641 TGTTGCTGAC TACTGACAAC CTGAAACCAA TAATTCCACA AGGAAAGAAT ACAAAAATTA GCAACATTTA TTACAAACAC 000720 000721 TTTCTTGTGT AGTCTTAGCA TTATTCTTCA GTATGTTGTA ATGTAGTGGT AAAAATACTG ACCATTTAAT TCCTAAAATC 000800 000801 CAAGAAACTT AGTTTTCTAA TTAGATCCTT AAGGTACTTA GTAGAGCTAA CTACATTTTG AAAGTCTTCT GTTTTATATT 000880 000881 ATTCAGTAAA TGTTTGGGTG GATAGCAGAT ATATTTTTCT GGATAAATGC ATCCAAGTAT TTTATTCTTT AGTTCATTCT 000960 000961 TACTTTTAAG TCTTGATCAT ATTGAATGCT TCTGAGTTTT CTATTAGAAT TCAGGATAAG TAATATAAGC AATGCAAATT 001040 001041 TTCTCATTAA TTTGAAGGAA TCGTTAATAG AATCAGTCTA ATTGTAAAAG ACATTACATT TGAAAAATAG AAATGTAAAT 001120 001121 GTTTACTGTA ACTTAATACT ATGTCAGTTT AGAAGCTGAG TTTTCATATT TCATTATAAT CTTAAGAGTT AAGGGGATTG 001200 001201 AGGTTAGTAT TTAAAAATTT GCTTTTCTGT TATTTTGATT AAATATAAAA CCATACTAAC AAAAAAAAAA AAAAAAA |
Predicted Small Protein
Name | NONHSAT093159_smProtein_110:235 |
Length | 42 |
Molecular weight | 4473.5592 |
Aromaticity | 0.0487804878049 |
Instability index | 73.1536585366 |
Isoelectric point | 9.30340576172 |
Runs | 11 |
Runs residual | 0.0923238066736 |
Runs probability | 0.0480319892085 |
Amino acid sequence | MKTVTIISVLKVVSKAVCIYVSNMPNILIACTLSLPFHILV |
Secondary structure | LLEEEEEEELLEELLEEEEEEELLHHHHHHHHLLLLLEEEL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTToooo |