NONHSAT093461
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT093461 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1630 nt |
Genomic location |
chr3-:180704383..180707515 |
Exon number |
2 |
Exons |
180704383..180705884,180707388..180707515 |
Genome context |
|
Sequence |
000001 AGGGCGCCTG TGCTTGAGGT TGGGGGTTGC GTCGCTCTCT GGTAAAGGCG TGCAGGTGTT GGCCGCGGCC TCTGAGCTGG 000080
000081 GATGAGCCGT GCTCCCGGTG GAAGCAAGGG AGCCCAGCCG GAGCCATGGC CGTTACGTTT TGCAAGCCAT GAAGCATATG 000160 000161 GAGCCTCAAG TAAAACAAGT TTTTCAAAGC CTACCAAAAT CTGTAAGACT TTGTTAATTC TTTGCTGCTT CTATTTGAAA 000240 000241 CCTAGAGCCA CACTTAGGGA AGGGTAAATT TCCAAATATC CATGAAGTTC TAAGTGATTG CTTTGGACCC ATTCTCCTGC 000320 000321 TTCCTGCAAG GAGAGTATAG AAGTTCTGAA CTTTGTGATG GTGCTACCCT GAAACATCAG ATGTTATATG TGACAGAGTT 000400 000401 GGATGGGGTT TTGACAATTC TAGTACCCCA CTAGACCCAA GTTTCACTTT TTCACATACC ATCACCTTCA GCATCATCTG 000480 000481 TACATATTCT TGTTTTCCTT CATCTGCTCT GCATCGCACA CACAGAGGTA TATGATTCTA AAGTGATCCG ATCTGACCAT 000560 000561 GTGGCCCTGG CACTCCCAAA CATCATACAT AGGTAGCACT CTAGTTAATT AGGCTATAGG GTTTGGCTTG ATGTTATGGT 000640 000641 CATACTCTCT GTGGTCACAG TTAAGAATAG ATTTGGCTGT GATCACCTGT TGAATATGTT GTGATTAAGT GTAACAGAAT 000720 000721 AGAGTGATTG TAGGCTTTAC CAATATGATT TCTGACATGG CAAGGTCAGA GGACCTAATA GTGGTATTTT CTGTATATAT 000800 000801 ATCTTAAAGT CTTGTTTCAA ATACACTTGA ACCTCTTGTC TCAAAAGACT TCTGTTCTTG AGCCACTTCT TGCAGATTTT 000880 000881 TATCTAGAAT ATGGCTAATT TGGAATGATC TTTCCTTTAC TCCCGGAAGA CCTGGCTTTC AGACACTGTT ATTTTGTCTT 000960 000961 ATATTTCTAA GATAGTTCAT ATTGACTGGA AAAAAATGAA TCTGTTTAAT GATCATTAAA ATACTACTTG TTGCTACTTA 001040 001041 TTTATAAACT TTATTCAGCT TTAGCTAAAA TACCTCGGGA ATTGCACTAA AAGTCCTCTG AAATGTCTTA GTTTTTCTTA 001120 001121 GTTCTGTGAA TATTTCCAGA CGTCTTTTTT AAAGCAACTT TATTTTATTA ACCTTTCTTT ACAAATGCAT TTCTTCTTTC 001200 001201 AGGCCTTCAG TGGTGGCTAT TATAGAGGTG GGTTTGAACC CAAAATGACA AAACGGGAAG CAGCATTAAT ACTAGGTGTA 001280 001281 AGGTAAAATA ATCTCTAATA TTTTTAGCAT TTTTCTACCA CTGTAGAGCC ATGAGGAAAT ATAAGAAAGA CCTTCTCTCC 001360 001361 TTTAATAGGA GAGGGTCATG GGGGATTTTG TCCTAGGAAG ATTGATATTA CCAATTCTAA TCAATGAAAC TGTACTGTTC 001440 001441 CTTCATGTTA TTTTTAAGAT GTAAACAATC CTTCAAATGA GAAGGCACAC TAGCACTTAA GCACTTTTTC TTTTTTCCTA 001520 001521 GAGTGTTTAC TAAAACACAG GCACTTTTTC ATTTATTTAA AGATAGACTC CTCAGCAGAT TATCACAGTG TTCAGTGTTG 001600 001601 TTCTCTGTAA CTGACATTTT TTTTGTGGTG |
Predicted Small Protein
Name | NONHSAT093461_smProtein_1184:1285 |
Length | 34 |
Molecular weight | 3813.4113 |
Aromaticity | 0.212121212121 |
Instability index | 55.4181818182 |
Isoelectric point | 9.98797607422 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0436318671612 |
Amino acid sequence | MHFFFQAFSGGYYRGGFEPKMTKREAALILGVR |
Secondary structure | LEEEEEELLLLEELLLLLLLLLHHHHHHHHLLL |
PRMN | - |
PiMo | - |