NONHSAT093687

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT093687

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

4916 nt

Genomic location

chr3-:183942735..183948316

Exon number

2

Exons

183942735..183947501,183948168..183948316

Genome context

Sequence
000001 GGCGCCGGGA GGCCGGCCCT GCGGGAACGG GCCGGGGAAG CTGGGCGCAG GGTGACGGGA CGCCCACCCC GCGCTCCAGA 000080
000081 GGCCAGCGCG AGAGTCTCAC TCCAGCACCC GGACGGGGCC TGCCGGGGCG CGAGGCCGAG CGGGAGCTCC GTCGCGCCCT 000160
000161 CCGCGGAGTT CTAGGTGCCC ACGGGATCCG TGTGGGTGGT GCCGCCTCTG CGCTCCGGGT GGCCCTCGGT CCCGGCACCT 000240
000241 GCCGGCCGCC AGTTCGTGAC TGTGGCTGCA GCGGCTCTGA GTCCCGGCAG GGGCGCGGGC CCTGCCGGCG GTGGTCCCGC 000320
000321 CCCCGTTCCG AGAGGCCGCC CCTCCAGCCT GCCCTGGCCA CGCCTGCTGC TGCTGCGGCG GGGCTGGCGC TCCCCCCTCC 000400
000401 TTCGGGCGCG GTACCGCCTC CGCGCCAGCC GCGGCAGCCC GAGCCAGACT GGGCACCGCA GTGCAGGGAC CGCGTCCCCG 000480
000481 CCGCCGCACG GATCCCCGTC ACTGCAGGAC CGAGGCCTCA GAGACCCCAC CCTTTCCATT CTTCAGGAAT CAGGCGTCCT 000560
000561 GCAAGTGCCA CCGACACTGC CGCGACCCCA GCTATCCCAT TACCACGACG GCATCCCATT CCCCAGCCCA CCCCACCCCC 000640
000641 TGCCCTGGGT TGCTTCCCAT CGCTGCAGAG ACCCTCCCTC CTGACTGCAG CGAACCCCCC AGCCCCCCAT CACCGTCACC 000720
000721 GCAGGACTCT TCCCCCAAGA AGCTGGCCCC TTTCCTTTGC AAAGTGCTCT TCATCACTGC AGAAAACCTC CCCCATCCCT 000800
000801 GCAGGTACTT TTAGTTCATG CAGCCACTTC AGTGACCACT CACTCCAAGC AGGGATTCCT CATCACTGCA GCGACCTCCT 000880
000881 CCCACCCCCA AGCAGCCGGC CTTGGCATCG CTGCAGTGCC AACCACTTCT GCTGGGGTGG GAGGGTGTGC ACAATAGCGC 000960
000961 CCTCAGCCTA TAACCCCTTG GTCTCTTCAG CTGTGCGGGC CTTGGGAGTG AAGCCTTCTA GCCTGAAGAG CCTTCTTATG 001040
001041 GCTGCAGACC GTCCCCTCAT AGCAGTGACC CCCACCCATC ACCGCAGCCC TGAAGAGAAA ACATCTCTGC TTGTCAGGAG 001120
001121 GGCCCCTTGT TATTGGCAGA CTTTGCATGT GCTTGACAGT GTTATGCTGT CAAAAAGTAG GAAGGTCCGG AAAACCTCTC 001200
001201 CCAGGTCCCC CAAGGAAGAG TCTGAGAGCC CTGGGGAAGT GAGAGGAGAT GACCATGTTT GGGGATCATC CATGTAAGCT 001280
001281 TTTTGGCAGA TGCCATACTG AGATTCTGCA GAGAGAGCTT GAGGAGAGCT GGGGATGGAG GACAGCCAGT AGGAAGTGAG 001360
001361 CTTTCGAGTC GGGCCCATGG TTCTCACTCC TCCGCATTAA CTCTCTCCTT CTGATTTCAA TCACTATCAC CAGGGATCAT 001440
001441 CCCCCCGGGG GATCCCTGCC TCCTTGAGTA TCTGAGCCCT CAACCCCAAC CATCTCCTTT GCTCACCCTA CTTAGCATGG 001520
001521 TGGAGAGAGC TTGACCTTTT CCCAGGGAAT TTCATGGGTG GAAATGCACA GGAATGATAC AGGGAGCACA GACACAGTCA 001600
001601 CACGTACCCA ACACACAGGG AGCTCCAGCT GGGTCCTAGC CCTCTTTCCA TACTACCTGG GTCATGGTTC CATTCACCTC 001680
001681 TCTCCCCCTT TCTCTACTGA GTCTGTTCTC AGCTTCATCC TGAACGAGGG TCCCTCTTTC AGGCCTAGGG AGAAACAGTG 001760
001761 GATGGGCTGA TGGTCCCTCC AGGTGATCCA GGGCCTCAGG TAGGACCAGC CCTGGCCCTG AGGGCCTCAC AAAGGTCCAG 001840
001841 GCAGTGGCCA CCTTTCCACA AGCACCTTGT GCTCTGCCCC TTCTACAAAT GAACCAAGAG CTACATGTAG CCCTTGGACA 001920
001921 AACATGAGGT TGCAAATAGC AGTCATTAGG GAGGTCTCCG ACACATGGAA ATGGAAAAAG AGGTCCTTCT GTTTGGTCCT 002000
002001 GAGGAGAGCT TAGATGTAAG ACAGCCTCCC AGGAAGATAG CATCCCTATC AGAGACCAGA CACACACACT GGCAGAAGTC 002080
002081 AAACTTTGCT GCAAAGCTGG ACCAACCCTG AGATCTTGCT AGGAAGGTCT CCTTAGCTGA GGCAAATGGA GGGAGAGACA 002160
002161 GGTGAATGGC TCCACAAAAA GCATAGGGCA CCCTGCAGGA TGAGGGGCAG GGGGTGGGGA GCCAGTGCTG GCTGCCTGGC 002240
002241 ACCTTGGGTG GGGCAGTAAG AAGGGTCTCT GAGGCCCAGC TGGAAGGCCC TCTGGTGGTG AGGCAGCAGC ATGACAGCCA 002320
002321 AGGGCAGAAG GGGACAGCAC AGGAACCAGA TTCCAGATCT GAGGCCGGGC TGAGGGATAG CATGGGGTGG GCTACGTGGT 002400
002401 AGTCATAGGA GAATAGATGa tatagatgat atacatatag atatagatat atagatatat tttttgagac agagtttcgc 002480
002481 cctgtcgtcc aggctggagt gtagtggagc gatctcggct cactgcatgc aacatctgcc tcccaggttc aagtgattct 002560
002561 cctgcctcag cctcctgaga agctgggatt acaggcgagc accagcatgc ctgggtaatt ttttggattt ttagtagaga 002640
002641 cagggtttca ccatgttgtc caggctggtc ttgaactcct gagctcaggc aatctgcctg cctcagcctc ccaaagtgct 002720
002721 aggattatag gcatgagcca ctgcgcctgg ccCATAGgag gatattgagc tgaaaagact tagcttctgc ctaggagagt 002800
002801 ctcacacttt agtgaaaagg gcagacaaat atacagttac agtagcttga gataagtgct gcattacaag agtaatagta 002880
002881 atggatatta taaaagcTTT TAACTGGCTG gcggtggctc acacctgtaa tgccagcact tcaggagcct aaggcaggag 002960
002961 aatcccttga ggccaggagt ttgagaccag cctggacaac atagggagac cctatctcca taacaattaa aaattaAAAA 003040
003041 ACAAATCTTA ACCAAGGGTG GTGGTGATGT GGGGAATAGG GTGAACCTTA GGGAACTGAC TTAGAAAATG GCACTCAGCC 003120
003121 AGGTCTTCTT GTTGCAAAGC ACAACTCAAT TATCTCCTGC TTGTGGGCTG CCTGTCGGCC TTTGGAGGGC AGAGGTCTTA 003200
003201 TTTCCCCAAA CTATAGATGA TCTACCCTCT CAGATTGGAG CTCCAGAAGA GATATACCTA GAGAAAAAGA GGAATTTTGC 003280
003281 CTCTTGCTGT CTAAAGCTTG ACTTCCAAAA TCCCAGCCCC TGCCTGAAAC CCAAATTGGA AGATGGTTTA GTTCATTAAT 003360
003361 TCatttgttc actcaagaaa tatttcttgt tgaagcctgc ggtgtgctag agctggaact acagcagaaa acaagacagt 003440
003441 ggtagcccct cccctcacga aAGACGTCAA TTAAACAATT AATTTTTAAA TTTTGTATTT CAAAATAACT TCAAAACTTC 003520
003521 TACAAAAGTT GCAAATAAAG CAtttttttc tgaaccattt caaattaagt tttacacatc cgacctcttt acccctaaac 003600
003601 acttcggttt gtcttttctt ttcttttttt tttttttttc agagacaggg tctcactctg tcacccaggc tggagtggag 003680
003681 tggcacaatc atagctcact gcagtcttga actcttgagc tcaaaggatc cttcctcctt ggcttcccaa agtactgggg 003760
003761 ttacaggtgt gagccaccat gcccagccag ttggtgtggg ggggggtagt tttttttatt tgtttgtttg tttgtttgtt 003840
003841 ttgaaacaca gtctcactgt tttgcctagg ctggagtgca atggctcaat ctcagctcac tgcaacctcc gcctcccggg 003920
003921 ttcaagtgat tctcatgcct caacctccag agtagctggg actacatgtg cacgccagaa tgcctggcTA ATTtttgtgt 004000
004001 ttttgttttt atttttattt tttgagatgg aatctcactc cgtagtccag gctagagtgc agtggtgcgt gtgcaatctc 004080
004081 agctcactgt gacctccacc tcccagttca agcgattctc ctgcctcagc ctcccgagta gctgagaata caggcaccca 004160
004161 ccaccatgcc cagctaattt ttgtattttt agtagagatg gggtttcacc aagttggtca ggctggtctc aaactcctga 004240
004241 cctcaagtga tctgcctgcc tcagcctccc aaagtgttgg gattataggt gtgagccact gctcccagcc TTTAAGagtc 004320
004321 ttctactggg agtagtttct cctttttgtc ttttgtgata ctgacacatt tgaagagtac tggccagttg ttttgtagaa 004400
004401 tgtccgtcag tttgagtttg tctgttgttt cctcataatt agattcagga tatgcacttc ccataggaac accacataag 004480
004481 tgacgttgta cccttctcac tatatctcat tgggaggatg tacatgtcag ttacagttac tggcgatttt aactttgatc 004560
004561 ctttcaataa ggtggtgtgt tagggttctc cagagaaaac agaaccaaca gagattgaga gagagagaga gagagagaga 004640
004641 gagagaatac gtatatataa aataaggaat tggctcgtgt gcttgtacag gcaagtccag tgcgggctgg cgggctaaag 004720
004721 accctggaga ccggatggtg cagatgaaat ttggaggcag cctgctggag aatttcctct ttctcatgga ggtccatctt 004800
004801 tttgttctgt tcaggcctca agtgattaga tgaggaacat tgtgaaggtt aactctgggt cttagcttga ctaaattaag 004880
004881 gaagacctaT TCAGAAGCCG Gggccaggcg cggtgg
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Predicted Small Protein

Name NONHSAT093687_smProtein_3107:3358
Length 84
Molecular weight 9199.6284
Aromaticity 0.0722891566265
Instability index 76.656626506
Isoelectric point 5.15277099609
Runs 10
Runs residual 0.0195448460509
Runs probability 0.0423423423424
Amino acid sequence MALSQVFLLQSTTQLSPACGLPVGLWRAEVLFPQTIDDLPSQIGAPEEIYLEKKRNFASC
CLKLDFQNPSPCLKPKLEDGLVH
Secondary structure LLHHHHHHHHHLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLHHHHHHHHHHLHHHE
EEELLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -