NONHSAT093966
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT093966 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
961 nt |
Genomic location |
chr3+:191089936..191090896 |
Exon number |
1 |
Exons |
191089936..191090896 |
Genome context |
|
Sequence |
000001 ATGTTAAGAA TTAAGTGGTT TTTCAGGGAC ACATAAAAGC TTTTAAAAGT ATTTTATATT TATTTTAATT ACTCCGATAA 000080
000081 ATTTGTAGAG AGTGGCGTAT ATGCTTGTTT CTTTGGGGAG AGACAGACTT TGAGGGAGTT TTGAGGAACA GGAAGTGGTG 000160 000161 ACCTCCTGAA CATGTGTATG TAAATACTGA AATTTCTCTT GCCTCAGCTG TGTTGTTATT GGGAGGTTAT GTTTTGTTGA 000240 000241 ACATGGAGTC CTCATTAATA TGCCCCTGTG TTAGACCAAG TGCAGTTCCA CAGAAACCAT ATTATAGTTC AGCTCATATT 000320 000321 TACAAAATAA TCCTTCTGGT CTTTGCAGTG GTCCTTTTCC AACACACCTG GGATATTCTT TCATTGTACT TCTCTGTATG 000400 000401 CCTTTGTATA TCTATTTGAT TTTTTGCCTT ACTTGCACGG TAATCACAGT ATATCATTAC AGAAATGGTC AGTTTTTCAA 000480 000481 CTTTTAACTC AAACTTTAAT ACATTATCTA TTAGAATGAT TATGGATTTT CTACAAATTT GAAATTGTAT AAAAACATTT 000560 000561 GTCAAATTTA TATCAACTCA AATGATATAT ATTATTTATT AATGAATCCA TGTTTTTCTT TCAAAGCCAC TTATTGAAGT 000640 000641 CATATTAGTG ATTTTTTAAG TTGTGGTCTT TGGAGTCATA GGACTGTGGT TCAAGTCCTG TCCCCTCCTA AGAACAATAT 000720 000721 TAATTTTAAT GAAGTTACGT ACTAAATAAA ATGGAGATTA TAAAAGTAAA TCCTTCATTT GGATTTGAGA AGATCAAATA 000800 000801 ATGCAATTTT GGTGAAGTAC TTATTTATAC ATATATCGGT GTTATATGTG TATAATGTAA TATTTTGTGT ATCTTATTTT 000880 000881 GAAAGCCAAA CATGGAGGCA CTCATATAAA ATGCAGATAT ATATGTGTAT AAATATGTGT GTGTGTGTGT ATATATATAT 000960 000961 T |
Predicted Small Protein
Name | NONHSAT093966_smProtein_242:418 |
Length | 59 |
Molecular weight | 6607.8849 |
Aromaticity | 0.137931034483 |
Instability index | 45.3396551724 |
Isoelectric point | 7.68170166016 |
Runs | 4 |
Runs residual | 0.087627889352 |
Runs probability | 0.0163840310899 |
Amino acid sequence | MESSLICPCVRPSAVPQKPYYSSAHIYKIILLVFAVVLFQHTWDILSLYFSVCLCISI |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooooo |