NONHSAT094060

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT094060

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1736 nt

Genomic location

chr3+:193796200..193841261

Exon number

4

Exons

193796200..193796257,193809242..193809948,193826643..193826963,193840612..193841261

Genome context

Sequence
000001 AACTTTGATG AAAAGCAGGG AAGTTTGGGA AGAAAATCCA AGACTTCTCT GGAGAGAGTC ATTTTTCACC TCCCAAGGAG 000080
000081 TTCAcatcta tgcacacgtt tccatcttac agaccaggaa acaggctcag agagaagaag ggaattATGT ACCTCGGTTT 000160
000161 AGAGCCAAAG TGTCCTGCCT GCATTCCAGC TGTTTCCATC CATGTCCATG TCAACTGGCA TCTGGAACTA CTCGTAGCAG 000240
000241 CATCCACTCA ATGTGAGTTG ACTAAATGGA GGAAAATCTA CTATGGTGCT TGGAAAAACT GGGACTCTCA TGATTTAGGA 000320
000321 TATAAAGATT TGTCGTCTGT CTGAATGGAA GAAAGAACAG GGCAGTGCTG TGGGGACACT AGGACGTCCT AAGGAAACAC 000400
000401 ACTCACTAAT TTAGGGTAAT CAATCAGGTA ATACTATTTA TGGGCTATTA ATGATACATG AGGATCACAC TCGGCCCAAG 000480
000481 TTCTTTGCTT TGTTTCACTC TCTTGCTCTG ACACCCTCTC CTAAGTTTCA AGGCTTTTCC CTCCCACCAC CCCTCCCAGC 000560
000561 CATATCACCA CCACCATATT TTAATTCCCC Atttttcttt ttttctttct tttttttttt ttttttttga gacagagtct 000640
000641 tcctctgtca cccaggctgg agtgcaatgg cacgatcttg gctcactgca acctccgcct cctggattca agtgattttc 000720
000721 ctgcctcagc ctcctgagta gcagggatta ccggcacgca ccaccgatac cagcctggaa gacaacggag ctgtcattct 000800
000801 gttaaaaaat taagAGAAGT ACGCAGAACC TGCCTTTTTC TAAATGAGAA GCTTTGGAAG CGACTGGACA CTTTTGGCCA 000880
000881 TTGCAGTCCA CAGGTAGCCT CTCTGGGGGC AATAGACAGA CTTTTTCACT TCTTGTATTT ACTCCCCAAA TGCTTGATTA 000960
000961 CATAGCTTGT CACCTGTCAG GGGGGCCAGC TAGCTAGTTG CTGGGTTGAG TGGTTAATCC AATGATTTGT ATAGCTGGCT 001040
001041 CACTAAGGAA ATCATAGGTA CTCAATATAT AGCTACTGAA CAATTCGAAG CATCTCTGCT CACACCACGA CTGAATGGAC 001120
001121 ACGTGAATCT AGCACATACA GTCGGAGGCC CGCAGAACCG GGATGGTCAT GTAtcccagc ctatgccagt tgtcccagca 001200
001201 tcagtgttac tagcattatc ttccactctc aaaagtgttc cagtttgaac cctaaatgat atggtcaccT CCACAGAACT 001280
001281 GGAGCAGGGA GGGTCTTGGG TGTTCATCTT TCCCACCAAT CTTATCTCCT ACAAGTGAGA TGGGTGTCCA GGGAGGATCT 001360
001361 GCCCAGGTTT ATGCTTTTGA TTTCCCCCTC CCTCTGCAGC CCTTCCCATG CCCTCCTGTC TCCGTGAGGG AGGGAGGACC 001440
001441 ACCCGCGCAT CCTGCACGCC AGGCCCATAT TGACGCCTGA TGCTTTTGCC TCCATTCAGA TCTCGTCTTT CTGTGAACCT 001520
001521 GAGGCTCATT TCAATTTTTC AAGGCAGGAC CACAACAAGC TCTGCATCTG CCTGCACACA AAGCCGAAAT CACAGTGCTT 001600
001601 GGGTGGTGGG GACCCTtttc cctgaaaaag aagaagtcag atcatttctt aaggtctctc ccagccttag aacctgtgat 001680
001681 tcATAAGAAA CTGGCTGAAG CTTTTGGTTT GTCAATATAC TCATGAACCA ATTTAC
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Predicted Small Protein

Name NONHSAT094060_smProtein_89:343
Length 85
Molecular weight 9756.2173
Aromaticity 0.119047619048
Instability index 40.3119047619
Isoelectric point 9.09844970703
Runs 9
Runs residual 0.0268425841674
Runs probability 0.0329447094153
Amino acid sequence MHTFPSYRPGNRLREKKGIMYLGLEPKCPACIPAVSIHVHVNWHLELLVAASTQCELTKW
RKIYYGAWKNWDSHDLGYKDLSSV
Secondary structure LLLLLLLLLLLHHHHLLLEEEELLLLLLLLLLLLEEEEEELHHHHHHHHHHHHHHHHHHH
HHHHHHHHHLLLLLLLLLLLLLLL
PRMN -
PiMo -