NONHSAT094310
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094310 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
677 nt |
Genomic location |
chr3+:195960018..195967751 |
Exon number |
2 |
Exons |
195960018..195960434,195967492..195967751 |
Genome context |
|
Sequence |
000001 TTGGGTATGA AACTTTCTCT TCTCCAGACC TGGACTTGAA CCTCAAAGCC TAAGGTGGAT GGCTTGGACA ATGAAAGGAT 000080
000081 GCTGTACTCA TTAGAATACA AGATTCCTTT ACTGTCCCTC AACCTTGACC AAATGGGAAG CATTCCCCCT TGTCAACACA 000160 000161 AGCTGGCAGA TACATTTGAC TCTACAGATG AAGGTGAACA ATGTTAGAAT AAAATTGCTT TGGATCTTGC CTGGAAGGTG 000240 000241 TTTTAAGTTT TGTAATAAAC AAGATGATGT CTGAAAATGT GTAACTGGGC ACCTTGCCTC TGTCCATGTC ACTATTAACC 000320 000321 CTTCAAGGTT GTATATTGCT Ggctaggtgc gacagctcat gcctgctatc ccagcacttt gggagcctga ggcgggagga 000400 000401 tcacttgagc ccaggaggtc aaggctgcag taagccaaga ttgcgccact gtactctggc ctggatgact gagtgtgact 000480 000481 ctatctcaaa aaaagaaaaa gaaaaGTACT CTCAAAATTT CCAGATCATA AAGAGAAAAG GGATTATGTT TAGAATTTTT 000560 000561 AAACACCTGA TTTTTATGGG AAAAATAAAG CTATAGTAAG TAAATTAACA AGAGCTAGGG TTTATCTGCC TAGATAAATC 000640 000641 ATATTTAGAT GTAATCATTT TATCCATTCT TATAGCA |
Predicted Small Protein
Name | NONHSAT094310_smProtein_305:595 |
Length | 97 |
Molecular weight | 11073.0953 |
Aromaticity | 0.0729166666667 |
Instability index | 62.74375 |
Isoelectric point | 9.73834228516 |
Runs | 13 |
Runs residual | 0.00118127147766 |
Runs probability | 0.0419673066732 |
Amino acid sequence | MSLLTLQGCILLARCDSSCLLSQHFGSLRREDHLSPGGQGCSKPRLRHCTLAWMTECDSI SKKEKEKYSQNFQIIKRKGIMFRIFKHLIFMGKIKL |
Secondary structure | LLLLLLLLEEEEEELLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLL LHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHLEEEL |
PRMN | - |
PiMo | - |