NONHSAT094412
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094412 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
956 nt |
Genomic location |
chr3-:197305084..197342531 |
Exon number |
6 |
Exons |
197305084..197305580,197306074..197306170,197319962..197320030,197327143..197327244,197340096..197340189,197342435..197342531 |
Genome context |
|
Sequence |
000001 attgacagct tttaacaagt tattatactc ctatgaacaa aatttggagc atatttgttt ctctctgcct gatttctcct 000080
000081 gaatttggaa actattttgc catggtctcc atgaactgat ttttttgtgc agtgggcagg aagaacccat cgggcagcta 000160 000161 caCATCTTGA AAGAGAAGCT CTTCCTGTGA GGCAAGTATT GTTCCTGTAC AAAACAGGCT GCCGGGTGCC GTATGGGAGC 000240 000241 GCCGCCTCCA GGTGAGCCAT CCTGGGTTCC AGTCCAGCCT CTATTCACTT CAGGATCTGG AGTATTACGG ACCACGAGAG 000320 000321 ATGCAGAAAT GGAGCACAGG CGGTGAGCCA AGGACACCCG AGgctgagtg cagttgcatg atctcggctc accacaacct 000400 000401 ctgcctcccg gattcaagag actctcctgc ctcagcctcc caagtggctg ggattacggT GTCTTGATGG GATGTCTCTC 000480 000481 TTTGGCACCC TTTGGGATAT GACTCTGAAC TCTGCCTTCT GGCTGCAGTC CCCTCAACTC TGGATGGAGC TCTATTATTT 000560 000561 TTGTGTGGGG GTGGGGGCTT ATCTCCTGAG CCAGCCTCTG CTTGTCAGAA CACACTCTTC CTGCAAGCAT GGTTTCCACG 000640 000641 GGCCCCTGCT ATGGCAGCCA CAGCCTCACA TCGTGAAGAA CACACTCTTC CTGCAAGCAC GGTTTCCACG CTCCCCTGCT 000720 000721 GTGGCAGCCA CAGCCTCACA TCATGAGGAT GATACGCAGC CATTCAAGGG ATAACCTCTA AGGACAGCCT GGCATGTCTG 000800 000801 AACTCACTTC TCTTCCCACT GCCAGTTGAG CCTTGCCTTC TAGCTCAGTC AGCACTGGGA GACTAGGCTA CTCAATCTGG 000880 000881 TGGTCTTTTG TTTCCAGCTC TCCCCAATAT CCCTATTGTG CATTCCTCAT GCCCCATACT CTCCTTGACT TCCCCT |
Predicted Small Protein
Name | NONHSAT094412_smProtein_320:466 |
Length | 49 |
Molecular weight | 5044.5727 |
Aromaticity | 0.0208333333333 |
Instability index | 71.7479166667 |
Isoelectric point | 5.37615966797 |
Runs | 6 |
Runs residual | 0.0405701754386 |
Runs probability | 0.0409968792322 |
Amino acid sequence | MQKWSTGGEPRTPEAECSCMISAHHNLCLPDSRDSPASASQVAGITVS |
Secondary structure | LLLLLLLLLLLLLHHHEEEEELLLLLLLLLLLLLLLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |