NONHSAT094548
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT094548 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1503 nt |
Genomic location |
chr4-:419604..467840 |
Exon number |
3 |
Exons |
419604..420908,466364..466490,467770..467840 |
Genome context |
|
Sequence |
000001 TCGCTCTGTA ACCTGCGGGT ATTGGATGAT TCGTAGCTAA GACTTCGCGA CACCCTTGAA GCTGAGAAAT GGAACCCTTA 000080
000081 ACATTCAGGG ATGTGGCCAT AGAATTCTCT CCAGAAGAGT GGAAATGCCT GGACCCTGCC CAGCAGAATT TGTATAGAGA 000160 000161 TGTGATGTTG GAGAACTACA GAAACCTGGT CTCCCTAGGA TATGTCGTTA TTGATCCAGC TCAACTTTAT GTATATGAGA 000240 000241 AACTTGGACA GTCTGGACAA TAGAATAAAT GAAGTCAATA AAACCATTCT TTTAACAAAC TTAATACCAT ACCTTCAGAG 000320 000321 TGTTATTTTC CTTTTTGTCA TAAGGTGTCT GGAAATGAAG TATGGAAATG AAATCATGAA TAAAGACCCA GTTTTCAGAA 000400 000401 TCTCTCCACG AAGTAGAGGA ACTCATACCA ATCCAGAAGA GCCTGAAGAA GATGTTCAAG CTGAAAGAGT CCAAGCAGCA 000480 000481 AATGCACTCA CTACTCCAAA CTTGGAGGAG GAACCAGTCA TAACTGCAAG CTGTTTACAC AAGGAATATT ATGAGACAAA 000560 000561 GAAAGTTGCT TTTCAACAAC AAAGAAGAAA GCAGCCATCA GAAATGTTTC GTTTTGTGTT AAAAAGTGAA GTTTTGGGAT 000640 000641 TACTAGGACA CAATGGAGCT GGCAAAAGTA CTTCCATTAA AATGATAACT GGGTGCACAG TGCCAACTGC AGGAGTGGTG 000720 000721 GTGTTACAAG GCAACAGAGC ATCAGTAAGG CAACAGCGTG ACAACAGCCT CAAGTTCTTG GGTACTGCCC TCAGGAGAAC 000800 000801 TCACTGTGTC CCAAACTTAC AATGAAAGAG CATTTGGAGT TGTATGCAGC CGTGAAAGGA CTGGGCAAAG ATGCTGCTCT 000880 000881 TAGTATTTCA TGATTGGTGG AAGCTCTCAA GCTCCAGGAG CAACTTAAGG CTCCCGTGAA AACTCTATCA GAGGGAATAA 000960 000961 AGAGAAAGCT ATGCTTCGTG CTGAGCATAC TGGGGAACCC ATCAGTGGTG CTTCTAGACG AGCTGTTCAC CGGGATGGAC 001040 001041 CCTGAGGGGC AGCAGCAAAT GTGGCAGATA CTTCAGGCTA CCATTAAAAA CCAGGAGAGG GGCGCCCTCT TGACCACCCA 001120 001121 TTACATGTCA GAGGCTAAGT CTCTGTGTGA CCGTGTGGCC ATCATGGTGT CAGGAACGCT AAGGTGTATT GGTTCCATTC 001200 001201 AACAGCTGAA AAGTTTGGTA AAGATTATTT ACTAGAAATA AAAATGAAAG AACCTACTCA GGTGGAAGCT CTCCACACAG 001280 001281 AGATTTTGAA GCTTTTCCCA CAGGCTGCTT GGCAGGAAAG ATATTCCTCT TTAATGGCAT GTAAGTTACC TGTGGAGGAT 001360 001361 GTCCACCCTC TGTCTCAGGC CTTTTTCAAA TTAAAGGCAG TGAAACAGAC CTTCAACCTG GAGGAATACA GCCTCTCTCA 001440 001441 GGCTACCTTG GAGCAGGTGT TCTTAGAACT CTGTAAAGAG CAGGCGCTGG GAAATGTTGA TGA |
Predicted Small Protein
Name | NONHSAT094548_smProtein_1034:1234 |
Length | 67 |
Molecular weight | 7467.7135 |
Aromaticity | 0.0454545454545 |
Instability index | 50.3 |
Isoelectric point | 8.73797607422 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0387660387661 |
Amino acid sequence | MDPEGQQQMWQILQATIKNQERGALLTTHYMSEAKSLCDRVAIMVSGTLRCIGSIQQLKS LVKIIY |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHLLLEEEEELLLHHHHLHHHHHHH HHHHHL |
PRMN | - |
PiMo | - |