NONHSAT094654
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094654 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
470 nt |
Genomic location |
chr4-:1050042..1075391 |
Exon number |
5 |
Exons |
1050042..1050291,1052109..1052181,1067387..1067450,1073431..1073476,1075355..1075391 |
Genome context |
|
Sequence |
000001 CAAACAGCTT TCAGCACAAT AAAAAGTTCA GTTTCAAACT GGAGTCGATG GAAGTTGATC TCTCTCCTTC TCCGATTAGA 000080
000081 AAATCTGAGA TAGCAGCCGG CCCTGCGAGA ATCTCCATGA TTAGTCCACC TCAAGATGGA CGAATGGGCA GCGTCTCCTC 000160 000161 CCTGGGCCCC GAGCATCCCG GCCTGACAAC GAGTCAGAGG AGCATGGGAA AGCCTCTCAG TGTGAAGTTT TGAAGTCATT 000240 000241 TCAAAGACAA AGTTGTGTTT TTACCGCGAC TTCCATGCCT CCTGCGGGAC CTGCTCACCT TGGGGCAGTG ACACCTGAAA 000320 000321 GATGAGCACC CAGCCACCCG CTCTGCCCCC TTCCAGTCCT CCAGCCTTCG TGCCCACCAG CATGTGTACG TTAGACAGCC 000400 000401 AGTGCGACTG TACTTTCCCT CTTGTTGAAA TAATTAAGTA ATGTAGTGGA ATAAAGTATT TTTCTGATTA |
Predicted Small Protein
Name | NONHSAT094654_smProtein_47:232 |
Length | 62 |
Molecular weight | 6405.3223 |
Aromaticity | 0.016393442623 |
Instability index | 62.6426229508 |
Isoelectric point | 9.68780517578 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0369995664113 |
Amino acid sequence | MEVDLSPSPIRKSEIAAGPARISMISPPQDGRMGSVSSLGPEHPGLTTSQRSMGKPLSVK F |
Secondary structure | LEEELLLLLLLHHHHLLLLLEEEELLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLEEE L |
PRMN | - |
PiMo | - |