NONHSAT094767
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094767 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1013 nt |
Genomic location |
chr4-:2073649..2078785 |
Exon number |
4 |
Exons |
2073649..2074026,2074695..2074756,2077179..2077246,2078281..2078785 |
Genome context |
|
Sequence |
000001 GAGTCTCTTT TCCTTCCCAC TCCTTACCTC CCTCCCTGCT AAGGAAAAAA AAAATAGCCT CCTTGGAAGT TGAAGGGAAT 000080
000081 GCAGTCCTGG GCCACCCTGC CTGAGAGAGA GCCTGGGAAA TGTCCTTTGT AGCTGAGGAC ACAGCCCCAC CTCCACCCCA 000160 000161 CCCAGCAACA AAGGGGCCAA CATGAAGAAA GAGAGGAAGG GCGGATTGGG GCAGGTCACC GGAAATCTCT GTTGCAAAGT 000240 000241 CCACATCCCC TGTGGAAAGT GCCAGCACAG CCCACCTGTA CCCTGGGGCT TGAAGGCTGC CCCTTATCCC AGCTGGGGCT 000320 000321 CTCCGTCACA TGCCCGTGAC TACTGCCCGG CAAGGACGCC CATGCAGACC AGCTCCCTAG GGCCCTGGGC CCGCTGTGCC 000400 000401 CATCTGTGCC AGCCAAGGAC GGGCAGCAGG GGCGAAGATA GGACGTGACC CCTGCCCCTG AAGACTCGAT CCAGGAGACA 000480 000481 GAGCCAAGGT CACACAGAGG ACAGAGCTGG TGGCCCAGAT CCATGATGAG CTGCTGTTTG AAGTGGAAGA TCCGCAGATC 000560 000561 CCGGAGTGTG CAGCTCTCGT CAGGAGGACC ATGGAGTCCT TGGAACAGGT GCAGGCATTG GAGCTGCAGC TTCAGGTACC 000640 000641 CCTCAAGGTG AGCCTGAGTG CCGGCCGCTC ATGGGGACAC CTGGTGCCAC TGCAGGAGGC CTGGGGCCCT CCGCCAGGCC 000720 000721 CATGTCGCAC TGAGTCTCCC AGCAACAGCC TGGCTGCCCC TGGGTCCCCT GCCAGCACCC AGCCCCCACC CCTGCATTTT 000800 000801 TCGCCTTCAT TTTGTCTGTA GCCCCAGGCA ACAGTGGGAG GAGAGAACTG GTTTCCAGCA GTCCATTGTG TGGCCTTCCC 000880 000881 CAAGGTCACC AGCTCTGTAC GCCCCAGGAC GCATTAACCC TTTGGGGCTG GGGTGGCCCG CCATCCCCTG GAGTAAATGC 000960 000961 CTGTGCAAAG CCCTCCTCAT CCTTGTCTGA GTGAATTCTT CCTGTGAGTG GGA |
Predicted Small Protein
Name | NONHSAT094767_smProtein_590:820 |
Length | 77 |
Molecular weight | 8041.0718 |
Aromaticity | 0.0526315789474 |
Instability index | 78.6486842105 |
Isoelectric point | 5.44097900391 |
Runs | 7 |
Runs residual | 0.0493042952208 |
Runs probability | 0.0348625936862 |
Amino acid sequence | MESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQEAWGPPPGPCRTESPSNSLAAPGSP ASTQPPPLHFSPSFCL |
Secondary structure | LLLHHHHHHHHHHLLLLEEEEELLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |