NONHSAT095089

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT095089

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1999 nt

Genomic location

chr4+:8358049..8360149

Exon number

2

Exons

8358049..8358702,8358805..8360149

Genome context

Sequence
000001 TGCTGGTATA AGAAATCTCC CCTGTGCAGA GCATGTCTCA GCAAGCCACT GGGACCAACT CACGCACAGT GATGCATGTG 000080
000081 CACGGATGGC TGCCACGGAG CAGAAGCCTT GATCTCTCCA TCTCTCAGGA GGAAGTTTGC TAAACTTGTA CATTCATGTT 000160
000161 ACTTGACTGG GAAAATGGCT GTGCCATCAC TTTAAGTGGA AAAAGATGTC CACAGAGTAT GACCCATTTC TGAAAGGAAA 000240
000241 ACCACACACA CGTACACAGA GGAAGAAAGT GTGCAGAATG GTGTACGCTA ACATGATCCC GGCAGGTGAG AGGAAGAAAG 000320
000321 TGTGCAGAAT GGGGAACACT AACCTGTTCC TGGCAGGTGA GGGGAAGCAA GTATGCAGAA CTGTGCACGC TAACATGATC 000400
000401 CCAGCAGGCG AGAGGAAGAA AGTGTGCAGA ATGGTGCACG CCAACATGAT CCCAGCAGGT GACAGGAAGA AAGTGAGCAG 000480
000481 AATGGTGCAT GCTAAGATGA TCCCAGCAGG TGAGAGGAAG AAAGTGTGCA GAACGGTGCA CACTAACATG ATCCCAGCAG 000560
000561 GGGAGAGGAA GAAAGTGTGC AGAACAGTGC ACACTAACAT GATCCCAGCA GGCGAGAAGA AGAAGGTGAA GTGAGCAGAA 000640
000641 TGGTGCATGC TAAGATGATC CTGGCAGGTG AGAGGAAGAA AGTGAGCAGA ATGGTGCATG CTAAGATGAT CCCGGCAGGT 000720
000721 GAGGGGAAGA AAGTGAGCAG AACGGTGCAT GCTAACATGA AGCCAGCAGG TGAGGGAAAG GAGAACAGTG CACACTAACA 000800
000801 CGTTCCCAGC AGCTGAGAGA AAAGTGGACA CCAGGGCCAG GAGACGGGGG CCCTCGAGGG GAATGCAGGG AGGACTCTGG 000880
000881 GGCAGGGGCA AATCACTGTC AATGTTCAGC TTCAGTGCTG GGTGCAGGAA CACTGGCATG AACCAAGGAG TACAATGAAT 000960
000961 CAAATTCTGG GCCCCTGTGG CCCAAaagta aatcaattaa attggagggg caactatttc tccatgtgga gttataagtg 001040
001041 atatctattt tcatctttaa agttttctac attaccaaaa tagtacctaa taatcacgtt agttttacaa tcagaaaaCG 001120
001121 GTGGCAGCAA GCAATGACAT TAAACTGAAC ATTTTTATTC CAATTATTCA AGTTTTTGCT GCACAGTATT TTCAAATGTT 001200
001201 TTATTTTCAA AATGACTATT ACAAAAAATG TAGTTTCCAG AATGTCATGG CTACACCTCA ACCTACTCCA CTCTTGCAGT 001280
001281 GGGGGCAACA GCTTTAGGAG CAGGGACCGT GTGTGGGGGC TGCACCCTTG CAGTGCGTGG CCTGGACACG GCCCAAGCCC 001360
001361 TCCGCCGCCC ACAGACAACA CTTTCACATT GATAAATATG CATGCCCATC AAATCCTGCt gtaaaccaaa actaaaattc 001440
001441 taagtccccc agccaactga gtgcatcccc ttgcagccac cgggacccaa agaaacctga aaaaccagtt caggccatga 001520
001521 atgggaagga gggctcggga tgccccatta tacctgcccc gctctggaat ttagacacaa ctgaccaaca ttaaaataaa 001600
001601 aacagagatc ctagactgac aaaacagact ctctgtagca ataagatacc caattcaacg ggactccggt atagcatcac 001680
001681 atgacacata gtagccccga aggaatcaaa gtattttacc tcaaaatata tttccttgac atatgttgaa atggcccttg 001760
001761 caaagctgtc tctcatgggg gaaatgtgca ttctgcagag aatctgcttc ccttattagg ctttttctgg agactctgac 001840
001841 accttttaag ggcctataag agacatgcac atctattctc tctgaagcct gccatccgga ggcttcatca acataacaaa 001920
001921 aaccttggct tccacaacca cccccgcccc caccttaact caagctgagt tcaacttttt agacaaagct taactcttt
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Predicted Small Protein

Name NONHSAT095089_smProtein_1211:1423
Length 71
Molecular weight 7826.9175
Aromaticity 0.0714285714286
Instability index 56.4985714286
Isoelectric point 9.68511962891
Runs 8
Runs residual 0.0305516265912
Runs probability 0.0222796325738
Amino acid sequence MTITKNVVSRMSWLHLNLLHSCSGGNSFRSRDRVWGLHPCSAWPGHGPSPPPPTDNTFTL
INMHAHQILL
Secondary structure LEEEHHHHHHHHHHHHHHHHHLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLL
LLHHHHHLLL
PRMN -
PiMo -