NONHSAT095594
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095594 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1571 nt |
Genomic location |
chr4+:14113614..14141109 |
Exon number |
4 |
Exons |
14113614..14113801,14127827..14128043,14128333..14128473,14140085..14141109 |
Genome context |
|
Sequence |
000001 AGACCAGGAA AGTGAAAGGA AATGGATATC GCTGCTGGAG GCAACGACTA ATTTAAGCAG AGTAGGAGAA AAACTCTTTT 000080
000081 TTTTTTTCCT TTGTGCCAGT TCCTTTTACA CGACTTCAGA ACATTCTATG ACAACCCAGC GTGCAACTTG GCACTGTCAG 000160 000161 AAGAGTCCTG GGAAAGAAAG GAAATGCGTT TTTCAGAACT TTACTAGGGG TAGTTGATCC AAATGGCATT ATTGGATGTG 000240 000241 GTGGTTTCCG GACACCCACC TGTGACACTG CGGTGACCGG TCTCCTGTCT GGCCTGAAGT GGATCTGGAC CCCACACAGT 000320 000321 CCCCATGTAC AGCTGATACC AGGCTGAAGT GGATCAGGAG GCTGAGGAAC TAAGCCAGTG TCAGGTGGTG CACCAGGCTG 000400 000401 CCCAAGTGGA GGCTTAGATG AACACAGGAT GATTATGGAG CAATACTTGA AGCCCAAATG AAGCTCTGAA CCCGGAGACT 000480 000481 TCTCAAAACC TGTCATCAAT GCTCTAACTC TTCTGTGGCC ACCTCCTTCT ACTGGAGTTT AGCCAGGTTC CAACTCTATG 000560 000561 GGTATATCTC AGTCATTTAG CATCTGCTCT ATCTTTGAGG CTGAGTTTCC AGAAGACCTG ATTCAACCAG AAGCAAAAGA 000640 000641 CAGTAGCCAA GAAGATGGCA TAGCATAAGA ATCTTGGAAA TTGATAAAAA CATCCCAGAG ATATCCAACA AAATTAGTAA 000720 000721 CTATGTGAAG AGATTCTGTA ATATTGGGTC TATTGGGCTC TGTGGGAAGG TATTCCCTTT GGAAATGACT GAAATGGAAA 000800 000801 TTTTGAACCA CTTTCAATGA TACAAGTTTG GGGTTAACAT GGAGATGGTG CTTCACAGAA GACACCACAT TTCAATAATT 000880 000881 GTATTCTTAT CGAATTGTTT AAAATTGGTC AGTGACTAAT ATTAAGCCTC TAAGAACAAA ATTCATTAGG TTTATTTAGC 000960 000961 CTGTTTTTGC ATTACTGCTA CAAAATCCAA TAGTTTAAAT AGCTAACTGA ATACTTTTGA TGTTAAAGAG CAAAATTTCA 001040 001041 TGAAGATTTT AGATCAAGAG AGCTACCACT GAGAAAAAAC AATGCAGATT TGTGGTAAAG TCCCATGAAT TTGTTGAACT 001120 001121 GCCAAGGCTT CTGATCATCA CTGCTGAAGA ACTTCTAATG GTGACTTCCA TCTCAGCTTT CTCATTGCCA ACTATTAAGA 001200 001201 ATGTATGGAT TATCCAGATG TTGCAACACA GTTGTGTTTT TGGCTTCACC ACTCCCTCTG GGCTGTGATT CTGTTTTTTT 001280 001281 TTTCTTTTAT TGTTGATGTT CTTTGTTTTT AATATGAGAA AGATTTGTGT ATTATACTTC AGTTTTAGTT TCCTTAATCA 001360 001361 CAGACTAGAC AAAAGAAAAT TGGCTTGGTT TCCTATTAGG AAACCACTTA GAAGCCATTA TCAGAATCGT AGACCATCAC 001440 001441 TGTGAACTAT ATCCAGGTGT TGTCATGAAA GTATGACATC CTAGAGTGGA AAAGCAACCT GGGTTTCCGA GACTGTTTTA 001520 001521 CTCTTTTATC TGGAATGTTG TTTTAGCTGC TATGGCTCCA ACAGGGTGAA C |
Predicted Small Protein
Name | NONHSAT095594_smProtein_1295:1444 |
Length | 50 |
Molecular weight | 6206.3707 |
Aromaticity | 0.204081632653 |
Instability index | 51.9816326531 |
Isoelectric point | 11.6425170898 |
Runs | 10 |
Runs residual | 0.0420297848869 |
Runs probability | 0.048560325031 |
Amino acid sequence | MFFVFNMRKICVLYFSFSFLNHRLDKRKLAWFPIRKPLRSHYQNRRPSL |
Secondary structure | LEEEELLLLEEEEEEEEHHHHLLLLLHHHHHLLLLLLHHHHLLLLLLLL |
PRMN | - |
PiMo | - |