NONHSAT095738
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT095738 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2688 nt |
Genomic location |
chr4+:20731428..20734177 |
Exon number |
2 |
Exons |
20731428..20733259,20733323..20734177 |
Genome context |
|
Sequence |
000001 CAATAAAACT ATATGCCTGA TTCTATTACT TTTGAATATT CACAGAGTAT GAAATGAGTT AGACCATCCC CTGAACTCAG 000080
000081 TGGCATTATG AAAAGGATGC AAATTTATAA CTGAAAGCTC AAATCTTTTG GGGATTGCTT TATATTAAAA CAAAGCTTGT 000160 000161 TTGCATAATA TGCTTCAGTG TCAAGCTGAG CAATCTATGC TAAAAGTGGT AGCTCCAACT TTAAGGGTGG TAGAATAGTT 000240 000241 CACATTTGTC TGTTGGATTC AGGATCTATT TGACAAGTTA AATCACATTT TCAAAGAGCT GCATGGAGCG CATTATGTTT 000320 000321 TCATCCTGTA AGGGAGAAAC ACAGAGCGAT TAAATTCAGC ATATCTGCAA GGAAAAGTAC ACTATTTTGC CCCTGAGTAT 000400 000401 TGCCTCCTCC CATCAACCAC CTCAACCACC TATGCCAAAA GCTCAAATAT TAAGTGTTTG CAAATGTAAA TGCCATTCTA 000480 000481 TTCTATCCAT TTTCCACATA GATGACTATG AAGGACCCAT TTTATATTTT GTGGAGTCTA TTGACCAGGC ATTAAACCAC 000560 000561 TTTATTTAAA TCTTTACTTG GTATTAATAG AGGATATTTC TCAAATCATA ATGCCAAAAT GGAAACTACA GAGGTGCAGA 000640 000641 GGTGTGTCAA AGCAAATGAG AATTTTGGCA TTCTATGTAG ATCACAGGCC AAATCACACA GACTTTTATA CAGGTACAAG 000720 000721 GAAAATTTGT GTGTATGAGC CAGCAGTTCA TGAAGATTGG AGGCTGGCGC ATAGGAGGCA GGGTGGTGGA TTAAGAGGTA 000800 000801 ACATGTTTGC AGTAATCATC TCTCTTTCTG TCTGCTAGTT ATGGCTAAAG CTGCATGGCC TGAAGGAGCC TTTAAAAATG 000880 000881 AATGGTCTCT CAATTACAGA GAAAGAATTG GGGAGCAGAA ACCACTGCTC AGTGGCTGTG TTCAGTTTAG CATATTCTTT 000960 000961 AGAAATGAGT TAGGGGACAG ACTTTGGGCA TTATTGGAGC ACTTGTCAGT TGCATGTGAA TAGCACTTAC TGAGCTGTTT 001040 001041 ATGGTAGTGG TAAATGGTGG CTGAACCAAT AATGGCTTCC ACTGCTAGAA ACCAAGTAAC ATCACCGTCA AGCAGCTTAA 001120 001121 TGTCACCAAA TTAATTCTCT CAAAGACCAC TGCATGGAAA TCCAAGTTGA GAGACAAGCA GACATCCAGA AAAGTAAGAA 001200 001201 CAACAATTTA AAAATAAAGA GAAAAACTAA AGAAACAACG GGTTTCTTTG TTTTCAGGAT TATTTGAAAA ATTCTTTTTT 001280 001281 TCTTTTTTTA GTTTTGAGGC AGAGTCTATT TCTGTTGCCC ATCATTCTGG AGTGCAGTGG CACAATCATG GCTCAACAGG 001360 001361 GATCAAGTGA TCTTCCTGCC TCAGCCTCCC AAGTAGCTGA GACTTCAGCC ACGTGCCACC GTGCCCAGCT AACTTAATTT 001440 001441 TTTTTTGTAG AGATAGATAG GGTCTTGCTA TGTTGCCCAC ATTGGACTCA AAATCCTGGC CTTAAGTTAT CTTCCCGCCT 001520 001521 CAGCCTCCCA TAGTGCTGGG ATTACAGTTG TGAGCTACTG TACCAGGCCT TAACAATTTT TAACTGTGGT TCTGCCCACA 001600 001601 CATCAAGTCA AATAATTCTA ACTAAGCTAA CACTGGTTTC TTTGATAACA GGCTACTACC TGGAGTTCTC TTCAGAGAAA 001680 001681 ATTTTCCACT GTTTATTTTT TGTGACTGAA GACCATTAGT GAGTTCAGTC AAAGAGCCAT TTCTTGTCCA CATACACTAA 001760 001761 AACAATGACT TTTCTCTTAG AAATCAGATA GAAGCTTGGC CTGTTGTGAT GCCATACTTG GCTATCTAGG AATTCAAATC 001840 001841 TCATGTATGT TTTATCCTCC ATGAATACTC TCTAAGGAAT TTGGGAATCA ACACAGTACG TGTACAACTT TTGTATCCCC 001920 001921 AGGGTTTCCT CCATAGCCTG ACTCAGTGGG CACTCTAAAT GTTGATTATG TAATTGGTGC TTGTTTTCAG AGTGGTAGGC 002000 002001 TTATGCTGCA TGTTGTAGAA GTGGTAAACT TAGGCATATG ATCTCTATAT TTCGCCCAGT TCATGGTAGC TAGCTGCTAA 002080 002081 TACTCAGTTT AGCTGTTATG ATAGCTGAAT TGATAGTTAT TACACTTTCA TTACTTACTT TTTGGCAGCT TTCAATGAAC 002160 002161 TCATCTATGG TAACAACCCC ATCTTTATTT TTGTCCATTT TCTGTTCAGG AAGAAAACAA AAAATTGTAT TTAGACTTAT 002240 002241 CCCTTAATAC CCTCACACCT GGACCAAATG AGCTGAAGCT GATAAAAAGA AAACCTAGCT GCTTATTTAT TTCACGTGGA 002320 002321 GGAACTGTTT CAGAGCAGGA ACCAGCAGTT TTTTAGAGAT AAAAATGATA GGGCCAAATG CTTCTGGCTT TTCCCTTTTC 002400 002401 AATATAATGT GGTGAAGATG TAGAGTTACT CTGTCCTAGG TAAAATCCCA CCTTCTAGAT GTGACAGAGC TTGGGCAATT 002480 002481 TGCTGAAACT TTCAGAGCTT GCTTTTTGTC TCATCTGTAA AATGAGATTA ATGAGGATTT ATAGGATTCT TGTAAAAACT 002560 002561 GAATGAAAAC AAAACTTGTG AAACATGAGA ACTGTTTAGT GTTGTATCTT GGATTTAGTG AATGTTCAAT AAATGCAGTT 002640 002641 ATCAGCATTG TAAATTCAAA ACCAAAGCTA TTAAATTAAT AAGATGGT |
Predicted Small Protein
Name | NONHSAT095738_smProtein_431:568 |
Length | 46 |
Molecular weight | 5181.0361 |
Aromaticity | 0.111111111111 |
Instability index | 49.6911111111 |
Isoelectric point | 5.74676513672 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0481915739269 |
Amino acid sequence | MPKAQILSVCKCKCHSILSIFHIDDYEGPILYFVESIDQALNHFI |
Secondary structure | LLLLEEEEEELLLLLLEEEEEEEELLLLLEEEEHHHHHHHHHHLL |
PRMN | - |
PiMo | - |