NONHSAT095812
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095812 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2210 nt |
Genomic location |
chr4+:24661479..24673191 |
Exon number |
2 |
Exons |
24661479..24661666,24671185..24673191 |
Genome context |
|
Sequence |
000001 ATAATGCAAG TGTAAGCTTG GAAAAAAGCA CTACGTGTCT GCTTGCACTC CTGAGCCTCC ACCATTGCTG TGAAAACATG 000080
000081 CCTGGGAGAG CCTGCTGGAA GACAGTACCC AGAGCAGCGC CCCAGTCTCT CCAGTTGACT AGCCAGGACC AGCCTAGATC 000160 000161 TTCTGACAAC TGGATGACCT TCAGATATCA TAAGAAAACA GCCGAAGATT AGATTTTGAT AATGAGAGAG CCCAACGATC 000240 000241 CTGGACCCCT GGCCGGGAGG ACAATAGGGG AAACAGGTGA AACACTGTGT GAGCTGGACC ACCCAGGCTC TCCAACACCA 000320 000321 GGACACCAGA GCATCCTTCC TCCTTCTTCT CTTCTGCTGC GACTTCCTGG AGGCATAGCA GAGTTACAAC TGCTGGCCAT 000400 000401 GTGGAACTTC TGTTCTCCTA TAAGTTTGCT CTGAGATGGA GAGATTGTGC CTGTGGTTCA TTAGGAAGAG CTCTTGGGAT 000480 000481 CAATGCCTGT AAAAAGGAAG GGAAGGAAGC AGGATTGGCC AGAAGGAGAA GTTGAGCTGT GTTGAAGCCT CAATGGAGAC 000560 000561 CTCAGCCAAT TCTGAGTCAT GTCCTGAAGC TAGAATATGT CCTCTAAATT ATCCCAAGCT GAGATGAGGG AGCTGGGCAT 000640 000641 TTAGCCCTGT ATTGGGCCAT TCTTGCACTG CTATAAAGAA ATAACTATGG CCTGGCGCCG TGGTTCACGT CCTTAATCCT 000720 000721 AGCACTTTGG GAGGCCGAGG CGAGCAGATC ACGAAGTCAG AGTTTGACAC CAGCCTGGCC AATATGGTGA AACCCCAATT 000800 000801 CTACTAAAAA TACGAAAATT AGCCAGGCGT GGTGGCACAT GTCTGTAATC TCAGCTACTC GGGAGGCTGA GGCAGGAGAA 000880 000881 TTGCTTGAAC CCAGGAAGTG GAGGTTGCAG TGAGCTGAGA TTGTGCCTCT GCACTCCAGC CTGGGGAATA AAGCGAAAGT 000960 000961 CTGTCAAAAA AAAAAAAAAA AAAAAAAAAG GAAAGAAGGA AATAACTGAG ACTGGTAATT TATAAAGAAG AGGTTTAATT 001040 001041 GGCTCACGGT TCCTCATGCT ATACAAAAAG CATGATGCTG GCATCTGCTC AGCTTCTTGG GAGGCCTCAG GAAATGTACA 001120 001121 ATCATGGCAG AGGGTGACGC GGGAGCAGGC AGTTCACAGG GCCGGTGCAG GAGGAGAGAG AGAGGCAGGG GATGCTACAC 001200 001201 GCCTTTAAAC AACCAGATCT CCTGATAACT CACTCTCGTC ACAACACCAC CAAGGGAGAT GGTGTTAAAC CATGAGAAAC 001280 001281 CACCTCCATG ATCCAATCAC CTCCCACCAG GCCTCGCCTC CAACACTGGG GATTTATAAT TCCACGTGAG ATTTGGGTGG 001360 001361 GGGACACAGA TCCAAAATAT ATCATACCCC CACGTTGATC AGTCATTAGA TGTGGGCCAC CCTAGTTGAG GCAGCTCCCC 001440 001441 TCGCTCAGGT GGTTCCTGAA GCGAGCTGAC AGCTGACGGC TGCATGCCAG AGGTACTGTC AGCAGCTGAA GGAGAGTCTT 001520 001521 TTGTGCTAAA AACCATCTTA AGCAGCACAG CACAGCGTCC ACCACATATT GTGGACAGGT GATATGGTTT GGATCTGTGT 001600 001601 CCCCGCCACA ATTTCATGCT GAATTGTAAT CCCCAATGTT GGAGGTGGGC CCTGGTGGGA GGTGTTCGGG TCGTGGGAGC 001680 001681 AGATCCCTCA TGAATGGCTT GGGCCATCCT CTTGGTGATG AGGGAACACT CACTCTGAGT GTTCACAAGA TCTGGTGGTT 001760 001761 TAAACGTGTG TGGCACCTCT CCCCACCCCC ACTCTTTCTT GTTCCTGCTT TTGCCATGGG ACTCGCATGA TCCCTTTGCC 001840 001841 TTCTGCCAGG ACTAAAAGCT CCCTGGAGCC TCCTCAGAGG CTGAGCGATG TTGGCGCCAT GCTTCTGGTA CAGCCTGCAG 001920 001921 AACCATGAGC CAGTTCAACC TCCTTTCTTT ATAAATTACC CAGCCTCAGG TATTTCTTTA TGGCAATACA AGAACAGCCT 002000 002001 AATACACCAG GGGTTTGCAG GTAACCCGGG CCCCTGTCCT TGAGGACACA GCAGCAAGCC ATTGGTAAAG CAAAACTGTC 002080 002081 CATAAGGAAG GCTGCTCCCA TGCAGTGTTC ATTTGGGCAG CCCAGAAATT GAGAAATCCT CGGTCCATTT CAAGTTTGGG 002160 002161 GGAAAACTTA TTTTTATCAT ATTTGAGATG AATAATAAAA GCAAATCCAG |
Predicted Small Protein
Name | NONHSAT095812_smProtein_221:433 |
Length | 71 |
Molecular weight | 7414.4756 |
Aromaticity | 0.0285714285714 |
Instability index | 50.6671428571 |
Isoelectric point | 4.73455810547 |
Runs | 7 |
Runs residual | 0.0448373408769 |
Runs probability | 0.0406288641582 |
Amino acid sequence | MREPNDPGPLAGRTIGETGETLCELDHPGSPTPGHQSILPPSSLLLRLPGGIAELQLLAM WNFCSPISLL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLEELLLLHHHHHHHHHH HHHLLLLLLL |
PRMN | - |
PiMo | - |