NONHSAT096007

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT096007

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2827 nt

Genomic location

chr4+:36507665..36510491

Exon number

1

Exons

36507665..36510491

Genome context

Sequence
000001 ATAGGGCCAT GAAAGAAGAA TGTTAAAAGG TGTTTCATGT ATAATGAAAT CCCCCTGGAA ATAATATCAG ATGAACTAAG 000080
000081 GGACTATGTA AATCAACTTT CACCTGATGT GCATTGCCTT ATTTTTAATT ACCTCCTTCT GTAGGATATC ATGTGTATGG 000160
000161 AATGTTTTCA GAAAGCTAAA GAAAGCAATG TCCTTGTATC TGAGAGTTGT GAAGGTTGTG GGTCCTGTGC AGAGTGGTGG 000240
000241 TGAAAATACA TCCCAAGTGG CTTTACAGAT TTCCAGTTTT CCAACACTTT AATAAGATGT CAGACATCAA ACAACTACAT 000320
000321 GGCCTTCACC CTAGATACCT TGAGAGGTGG AGAGTACAAG ACCATGAGAC ATTTAGCATT CTAGGAGTCC TAGAAGCTTT 000400
000401 GCAAGCATAT CCAAAGTTAC TAGATGTGGA AACCTCTCAT TTGTAGTTGG CAGAGTCCAT TTGgacaaat atggcacatg 000480
000481 ttctgtaggt tacctacagc aTAACCTACT GCCGCTGTGG GTTATATTTT AGGGAAATTC TTGTAATGAA TGATGAATCA 000560
000561 TTTCTGACTC CTCCTGAAAA TAAACTGAAA ATTTCTATGA GATCCAGAAT AAAAACTTCA TGTTTAGTAG GGGTAAATGT 000640
000641 TCCTGAAATT CTTTATAGTT CAACCCTCAG ACACCTCTAT TTGGAGTAGT TAAAAGTTAC TAAACCACTG CTGTTTAAAA 000720
000721 GCTTTCTGTG CATCAGCTTA AGATCTTTCA TCATGAGGAA ATGTAAAGGA CCCTTAAATT CCTGAAAATA CATCTTTTTA 000800
000801 GTAACATATT TAGCCTCTTC CTGAAACTAG GAACACCTAG AAATGGTTCC AGTTCCTTTC ATTGTAGGTC TCATCTGATA 000880
000881 TGTAATTGGA GGCAGTTAGA GATCACATGA TTTTAGAAAT TTGTGCAGTA TTGTTTGGGG AGTTTGCAAA AATGCTCTTA 000960
000961 AAAAAGATCT TAGTTCTTCA CCCTCACTGC CCTGTAGCTT ACATAAAGTT TGAATCCAGC ATTCCTGAAC CAACAGTTAT 001040
001041 GTCTTTTTTT TTCATTAAGA TGTCAGAGTT GAAGTTCTAC AAGTGTGAAA CCCACCATCT GGGATATGTA GATGAGTGAG 001120
001121 CTGCAGAGCA GAATGGCTGA TGCAGATCTG GTAAAGTATG GTTTGACTGA TGTGGTAGAA TATCCTGGTA TCATCATCAT 001200
001201 TATAGGAATA AAGGTAATCA ATGAAGTTTT TCCTATATCA AATATCTGTA ATTTATAACT GTCTTATCTA TATAAACCAT 001280
001281 ACTATTGGAT CTCAGACCAC TCGAGATGGA ATTGATTGGT TAATATCAGC CTAGTTCAGT GCCATATACT GAAGCCTGAT 001360
001361 TCCTTCGGCC AGTTTATTGA ATTGTTGCCC AGTTGGAGTT TATTTGACTG GACTATATTG TTTCGTCAAC CACTCAAGGG 001440
001441 CTATACTTGA GTTTGCTTTA GTGCAGGCAT AGGAATTTGG GTTTCCTTGG CCCTTGTTAG CAAATAGATC TCCAAGAGTA 001520
001521 ACAACGATAA TAATGCCCAG AATAATAATG CCAACATCCC AAGACAACAA TTGCCATCAC AAAGATAACT CAAATGAGGA 001600
001601 CAATGACTTT CAGCAAGACC TGCAACCAGG ACAGCAGCAG TTTGCACCTG ACACGTTGAA TGAGATGGAA GACAAGTGCA 001680
001681 AGAAGATGGA GAGGTGGTGG CTGAGAGTGG AAGTAATACT CCAGCTAATA GGCAATTATT TTTGTGAATA CTAATGAGAA 001760
001761 ATAAGCAGGA CCCAGTAGTC TTCAGTATGG AGTAAAACCA ACATCAGTTA CTGTTCATTA TTCAGAGTGA TGATGAAAAA 001840
001841 GACAACCTAG AACTTCAAGA AGTCTGGACT CTTAAGAAGG GTGCTTGTCA ATTACTCTGA GCTTAAATTA CAAATCAGAG 001920
001921 AGTCAGTATA GTCCATAGCA TTGTCAGACG TTGCCAAAAC AAAGTCACAC CATGCCATGA AGCCGAAGTA GATGGCAGAT 002000
002001 AACCCCATCA GTGTCAGTGA TCCTGTGATA AAGGGTGACC ATGTGCATGT CTTTGTATTA AAATCCAAAA ATCTTGTGGA 002080
002081 AATAATTATG ACAAACTATG AAGTCACAGA TCTAGTGCTG AAAAACTGTT TCAAGATGAG ATTCATTCAT ATTATGAGGC 002160
002161 ACAAGTTACT GAAACATCTA AAAATAGAAA ATGCACAAAT TGTAAATTAA TTTGACTATG TACAATACAA AAAACTAAAT 002240
002241 ATGGATTACA CATTAGACTA GATACTAAGG ATGCCTCCTG AAAGAAATCA TATCATATAC CTATGCCCAA TGTAGCAGGT 002320
002321 AAACGCACTA CCTTTGGAGC AGAAGTTATT CAGTGGTCTC TACCCCTGTC TATCATATCT GTATTATCCA TGAATTCAGT 002400
002401 AACCCTCCCA ATATCTGGAA CAAAGAGTGG ATTTGCAGCT GAATAGACAC AATAGAAAAC ATCAATCAAG CATTTGTTAA 002480
002481 GTATGAACAC TTCCATGAAG CCACTTAAAA TGAAGATCAC TTCCCTTTCA CTGCTCCTGA GTACCCCTGG GAATGAAAAA 002560
002561 TGTATATTTA GAAAGTGCTG TGGTTGGAGC TTCCTGGCTG AGGTCACTAT AGCTGCAGAG TCCAACAGCT TTGCCTATAT 002640
002641 GAATTTGAAA ATAGTGAAGC GAACACCGTC CATGCTCCTT GAAGGAAACT ATCTGTAGAT TTTTGTATTA AAATAATAGA 002720
002721 AGAAGAAATT CCTAAGACCC AGCCCATGAA AATGGTCATG AGCAAGTGGT GGCAATTTGC ATCCAATATT GTGTTAATGC 002800
002801 AGAGCCAATT GAAATGACTA CATTTGA
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Predicted Small Protein

Name NONHSAT096007_smProtein_1532:1753
Length 74
Molecular weight 8818.7722
Aromaticity 0.0958904109589
Instability index 75.2945205479
Isoelectric point 4.60369873047
Runs 7
Runs residual 0.0482545293858
Runs probability 0.0127438362732
Amino acid sequence MPRIIMPTSQDNNCHHKDNSNEDNDFQQDLQPGQQQFAPDTLNEMEDKCKKMERWWLRVE
VILQLIGNYFCEY
Secondary structure LLEEEELLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHH
HHHHHHHHHHLLL
PRMN -
PiMo -