NONHSAT096119

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT096119

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1134 nt

Genomic location

chr4+:40168295..40169451

Exon number

1

Exons

40168295..40169451

Genome context

Sequence
000001 GTGAAACTCC ATCTAAAAAA AAAACAAACA AACAAAAAGA TAATTAATAG ATGCACTTTT TATTTTAAAA TTTTGTGGGT 000080
000081 ACATTGTAGG TGTATACATT TATGGGGTAC ATGAGATATT TTTGATACAT GCATGCAATG CATATTAATC ACATCGGGGT 000160
000161 AAATGGGATA TCCGTCCCCT CAAGCATTTA TCCTTTGTGT TACAAACAAT TCAGTTGTTT ATTTTAAAAT GTACACTAAA 000240
000241 TGATTGTTGA CTGTAGTCAC CCTTTTATGC TATTAAATAC TAGATCTTAT TCATTCTAAC TACACTTTTA CATTTTGAAA 000320
000321 CATAGTGAAA ATGTCATACT TGATATTAGA GTGAATTATT CAGTGTACAC ATTATATGTA TTTTAATATG TTTCTCTTTA 000400
000401 GGCTGCCTTC TAGTACCAAA TGTTATAATC AGATAATTGA CCTGGTGTTT GTGGTGATCT GATATTATCA GGAAAAGCAT 000480
000481 TACTCTGCCT TTTTAAACTC TTAAATTGAT ACAACTGCTG GAAGAAGGGA GGACAGATCC AAGAGATCTA ATTTGTATAT 000560
000561 AATGGGAGTT CCAGAGTGAA ATACAAGAGA AAAGCCAGAT TTAATAGAAG TAAATTTCCT GAGCTGAATA AAGCCTTATA 000640
000641 TTTGCAGGTT GAAAGTGTTC ACTAAATTCT AGGCAGGATT GATGAGAAAA GGCATACACC TAAACATACT CTGACAGAAT 000720
000721 TCCTGAATCT CAAAGTTAAA GAGAAAAATA TATAAGATTC CAGACAGAAA GAAGTTATTT GCAATGGGAA AAGAATTGGA 000800
000801 CTGGTATCAG ACAGTGGAAT CATATCTATA CCTGTTAAGA GAAAAGGAAA GTAACCAAGA AGTCTCTTTC CAGCCAAGCA 000880
000881 TCATTCACCT GCCAGAGTGA AAGGGATGCA GAAAGGATTC CAAGAATCTA TCATCTGCAT ATCCCCATCT GAAGAAACTG 000960
000961 AAAAGAGGAC TGTAACTAAA TAACAAATTA ATGAGAATAG AGACTTCAAG AAATGAGAAG GTAAAGTAGA AAGGGAAGAT 001040
001041 GATGAGTGAA CAATAAGCCT TGTAATATAC ATGGGTATGT ATCTTAATGT ACTTGGATGA TGATGAAATG ACTGAAAATG 001120
001121 TGTACTATAC GTGT
[back to top]

Predicted Small Protein

Name NONHSAT096119_smProtein_128:226
Length 33
Molecular weight 3608.2394
Aromaticity 0.125
Instability index 108.75
Isoelectric point 7.86553955078
Runs 7
Runs residual 0.0271045918367
Runs probability 0.0209200797436
Amino acid sequence MHAMHINHIGVNGISVPSSIYPLCYKQFSCLF
Secondary structure LLLLLLLLLLLLLEELLLLLLHHHHLLLEELL
PRMN -
PiMo -