NONHSAT096221

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT096221

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3015 nt

Genomic location

chr4+:44018877..44024095

Exon number

2

Exons

44018877..44019387,44021592..44024095

Genome context

Sequence
000001 CGCAGAAAAA CGAGGGGTTG CAACTGCCAC GCAGCAACTG CCACACAGAA GAAGGAGGGA CTGCAACTGC CATGCAGCAA 000080
000081 CTGCCACACA GAAAAAGGAG GGGTTGCAAC TGCCACGCAG AAAAAGGAGG GGTTGCAACT GCCACGCAGc aactgccacg 000160
000161 cagaaaaagg aggggttgaa aagggagtag cttctgatat tcagtaagta cgaatcggcc ttaggttccc tgcctcaaga 000240
000241 ccctattctc ctgcctcaCt tttagctaag ggttattaca aaagagtcag aaagttaaga caaaatatga aagtttataa 000320
000321 agtaaaaaga gttacagtga gctaagtata acttattgaa aacatttttt taatttagta tagcctaact gtgtttatac 000400
000401 agtctacagt agtatacagt aatatcctag acctccacat tccctcgcca ctcactcact cactcaccga ctcactcaga 000480
000481 gcaacatcca gtcctggaag ctccattcac aaagacattg gatttattaa aaatgacacc aaaggtagga taaaaattgt 000560
000561 ttaaatgcct tttaattttg tgaggaatct agaattctat acctagccat gttttcaatt aaatgtgagg gtggagtagg 000640
000641 gacattttca aaccttacaa cattttctct cttgcacatt ttctcaggaa gctattggaa gagatgctca aagaagaaaa 000720
000721 aattaccata atccaataaa gaagaagacc tgagatccag gaagcagatg atctgaactg cagagaaagt tcaggaaagt 000800
000801 tccctcattc atgatgatgg gaaataacag taaattctgt acagcagtct tggacaacaa ccaatctaaa ctggcacagt 000880
000881 gcagaggcaa tcaacagaga acataatatt gatagaatgc ctgacgcttt tgattgtatt cacaggaaac ataaacaatt 000960
000961 ggaagacagt ttatgaatga attagtgata agcaTTtttt ttcaactttt attttagatt caagggtaca tgtgcaggtt 001040
001041 tggtgcctgg gtatactggg tgatgctgag gtttgtgtta caaatgatcc catcatccag gtactgagca tggtatccag 001120
001121 tagttagttt ttaacccttc tcctgtctct ctcctggtgg tccccagttt ctactgttgc catctttatg tccatgagta 001200
001201 tacaatgttt agctcccact tgtgagaaca tgcgtatttg cctatttaat tatttgttta tttgttgaga catagtttca 001280
001281 ctctctagcc cgatcttggc tcactgcaac ctacgcttcc tgtgttcaag cgattctctt gcctcggcct ccccagtagc 001360
001361 tgagattaca ggcacctact accatgcctg actaattttt gtattttaat agagataggg ttgcaccctg ttggccaggc 001440
001441 tggtttcaaa ttcctgatct caagcgatcc actcaccttg gcctcccaaa cggctgggat tacaggcttg agccaccacg 001520
001521 cccagccact atttgctttt ctattcctgc attaatttgc ttaggataat agccctcaac ttcatccatt ttgctgcaaa 001600
001601 gaaaataatt ttgttctttt ttagggctgc atagtattcc atggtgtata tgtaccacat ttgttttatt taatccactg 001680
001681 ttgatggaca cctgggttta ttctatgcct ttgctactac aaatagggct gtgatgaaca tgcaaaggca tgtgtctCCT 001760
001761 TGAGataaat attttaaaaa tacaataaaa tcaaaaaaat taatGTCAGG GCTAACATAC AGTTATTAGA AAAAAAAATA 001840
001841 TTTTGTTATT ATAGATAGAC ACTAGCTTTA acataataat agttatgtaa gtagtcgaag ttcatatgat caaaattatt 001920
001921 atttagctgt tttaaaagaa tgcagatata agagatatac cattaatggt gaatagttcc agtaaaagca agctaagctc 002000
002001 tctttcacat tccatagagg gaatttaata agccctgaaa ccgaaagttc aagaaGGAAA AGTGCAAGTC CTACATGAAT 002080
002081 TGATCAATGA TTGCCTCTGG AAATTATTGG TGTGAATGGG GAGGCAAAAT TGCTAGTTTG GTTAATAAGC TATGTAACTG 002160
002161 TTTGATAATT CTTCACTTGC ATGTAAACTT CGGTACAAAT AAAAGCTAAT GAAAACAGAG ACAGAATTAT TAAATCATCA 002240
002241 TAACATAAAG TTAACATTTT TCATCATTTT TCACTTGTTC AAAGATCATA AGAAATTTTC ATCTTAATTT TCAAGCATCA 002320
002321 ACTAATGTTT CTACTCTCCC TGAGTACCAT AAAAAGCCTT CTGTGGACAG TCTAAGTGAC AATGACACAT TAGATTTGGC 002400
002401 AAAAATTACT TTCAGATGTA AATCAATTTG AGAATGAACT GATGCTCTGA AACCGGAATT TACTTGTTGC TCAAATTTGC 002480
002481 CCCAAAATAA AATAATTTTC AATCATAGGA GAATTCACAG GGCCCAGCTC TCCATTGGTG TTCCAATCTA TTCTCTGACC 002560
002561 TCTATGCTGT ACACAAGAAT CCTCAATGGT TTTTCTGGAA CCCAAGACAG AAATAATATC CCAAATGATG CTTGCTCTAA 002640
002641 GAGTATCACT CACCCAGGGG GTTTACCCCC TGCAACTTTC CCTTTTACCA GTTTTGCTAC AGATTTTTAT GAACTTAGTT 002720
002721 CCCCAGTCAC CAGGGCCACA GATGTTTGAA ATACTTTTCT GTCTTTTTTT TTAAGTGATA AACAACTGAA TTCCTATTCA 002800
002801 CTTTTACTCC ACGAGTGACT TTACAATACA TTAAAAAAAG ATAAACTGTC AGTATTCTTT TCTTTAAAAA CTGTAAAATG 002880
002881 CCTTTCCACT TATTTCTTAT ACTATGTTGT CTCTCAGATA ATACATTGAT GCAATTTTGG ATAATGTTTT AATGAAGAAG 002960
002961 TTGACAGTAA TGCACATTAA TTAAAATATG TAAAAATCTA TATTCATAAC ACGAC
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Predicted Small Protein

Name NONHSAT096221_smProtein_2585:2773
Length 63
Molecular weight 7115.6549
Aromaticity 0.112903225806
Instability index 74.0064516129
Isoelectric point 4.78338623047
Runs 9
Runs residual 0.00847926267281
Runs probability 0.0244558283774
Amino acid sequence MVFLEPKTEIISQMMLALRVSLTQGVYPLQLSLLPVLLQIFMNLVPQSPGPQMFEILFCL
FF
Secondary structure LEEELLLHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHH
HL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL
LL
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