NONHSAT096270
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096270 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
654 nt |
Genomic location |
chr4-:47853074..47879161 |
Exon number |
6 |
Exons |
47853074..47853165,47853873..47853959,47857076..47857180,47864863..47864932,47877144..47877310,47879029..47879161 |
Genome context |
|
Sequence |
000001 gagtagcaaa tcagaaagta ctgtgcctga tcttttaact cccagcccaa tgtgctcttc tactcaTGTT ATTTAAATAG 000080
000081 AAGATTTTTG TAGGTGTACC ACATAGGAAG AGCAAATGAA ATAAACTCTT TAGGCTGGCC CAGAATGCCT TCATTGTGAG 000160 000161 GAAGGGTGCT CCAAGTCACG GCCACTAGGT TGTCTTCACC CATGTATTTT GCGATGTCAC CCTGGAGAAT GTCCACCTTG 000240 000241 TGTTCAGATG CTTAGAATAA AATGTCACTG TAAGATCACA AGCCTGTATG TGGAATGTAG AAAAATAACC ACAGCTGATG 000320 000321 TAAATGAAAA GAACCTCCTC AGTTGTTGCA AAAATCAGTG CCCTAAAGAG CTTCCTTGTG GTCATAGATG CAAAGAGATG 000400 000401 TGTCATCCTG GTGAATGTCC CTTTAACTGC AACCAGAAGG TAAAACTTAG ATGTCCTTGT AAAAGAATAA AAAAGGAATT 000480 000481 GCAGTGCAAC AAAGTACGTG AAAATCAGGT TTCAATAGAA TGTGACACAA CGTGCAAGGA AATGAAGCGG AAAGCATCTG 000560 000561 AGATAAAAGA AGCAGAAGCC AAAGCTGCTC TTGAAGAAGA AAAACGAAGA CAACAGGTAA CCAAACAAAA TACCCAGATT 000640 000641 TATGTCTCTT AGCA |
Predicted Small Protein
Name | NONHSAT096270_smProtein_323:442 |
Length | 40 |
Molecular weight | 4285.2179 |
Aromaticity | 0.025641025641 |
Instability index | 49.6769230769 |
Isoelectric point | 11.5816040039 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.036036036036 |
Amino acid sequence | MKRTSSVVAKISALKSFLVVIDAKRCVILVNVPLTATRR |
Secondary structure | LLLLHHHHHHHHHHLLEEEEEELLLEEEEEELLLLLLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiii |