NONHSAT096285
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096285 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2516 nt |
Genomic location |
chr4-:48341837..48344353 |
Exon number |
1 |
Exons |
48341837..48344353 |
Genome context |
|
Sequence |
000001 AACGAGCTAC AACCCTGTTA CTTGCGCACG CCTCGAACCC CCAACTCCAG CTGACGTTCC CTCTGCCAAA GCAAGAAAAC 000080
000081 CACAAGTCGC CACAGGAGAG CGGACCCGGC TACACAAAGC GAGGCGCCCG ACCAGAGGGA CCCTCAGAGG ACGCTCTCCG 000160 000161 CCCCCGGGCC CGTCCCCGCC CAGCTCCTGC CCGGCGCCTC GCGCTCACCA GCTCTCCTCC TCCTCCTCCC AGCCTGACAG 000240 000241 GCGCTCCAGC TCGTCGGGCC GCAGCGGCTC CACCTCGTCC AGCAAGCCGC CCTCGCCCGC CGCTAGCAAG GAGGTGGCGT 000320 000321 CCCGCAGCTC TTCGCTACTC GTCCGCCTCG GGCCCGACCC GGGCCCGCCG CCCGACTTGG CGCTGAGGCC CAAGGGGAAG 000400 000401 CCCCGAGGAG ACGCCGCGCC GGAGGAGGGA ATGGACGCGC CGGCCCGAAC CGGGCTGCCG GGCCCAAGGG AGCCGGCGCC 000480 000481 CTGCACGGCC CCCGAGCGGC TCCTCAGCTG TTCGTTCTGC TTCTCCAGCT TCTTCACCAG CTCCTGCAGC TTCCGCACCT 000560 000561 CCTGGTCCGC GTTCACGTTG GAGTTAACGT CCTCCATCCC GGCCCCGCCG CCGCCGCCGC CTCCGCCGCC CGCTCGCTCT 000640 000641 CGCAGCGACA GGAAAGAGAC GGAGGAAAGA GGCGTCGCCG CCGCTCACTC TAGCCGAGGC GCCGGCATAT AGCAGGACCA 000720 000721 GGCCCCACCG CCAGGGTCCC CCCACCTCGG GTTCCAAAGC GCCGCTGGCC CCAGCCGAAC TGCCTCATCT GCGCCGGCTC 000800 000801 CGGGATTGGG GGAGGCGGCG CCAATATCCG GCCCCTGCCG CCATCTTCCC TCCGTCCCTC CGCCCCCCGC GGGCCGGCCC 000880 000881 AGTCGGTGAC CTCAGAGCGT CGGGGGTGGA CGCGGCCGCC GGCGGGCGCT GAGAGGACCC GGCGCCAGCT CGCGGCGGGG 000960 000961 CGGGGCCACG GACGGGGCCT ATGGGGCGGG GCCGGTGCTT GAGGGGCGGG GATTAGGCCG GAAGGGGCGT GTCGGCGGAT 001040 001041 GTGGGACGCG GCCGGGCTGG CTAGGGAGGG TCCCTGCAGA ACGGGAGGCC AGCAGAAGGC TCGCGGCGGG CGGGGCTGAG 001120 001121 GTGGCTAACA AGGTCCTCGA ACAGCCTCGC CTGTTGGTCT GGGCGTGTGG GCGTGTTCTC CACCCCTTAC AGGGAGTGTG 001200 001201 GGACCCGCGG GCCAGTCTCG CCCTTGTTCC GGGCCGGATC TCGAGTGGGC GCTCAGCCCG GCGGTGGAGA GACAGTTTAC 001280 001281 TTTGTTCAGC AAATATTTAA TCGATGCCGA CTTTTAATTG GAGATTGTCT CGGCTGGCAG GAGCCTCTAG ACTGCCTGTG 001360 001361 TCCTGTTTCT TCCCCTGAAA ATAAGAAACC CCAGTTTCAG ACAGTTAAGA GAGGTCTAAG GTCAAAATAA TCATAATTTC 001440 001441 TTGAGTGCTT CCTACTGGCC AGACAGTGTG CTAAGCACTT TTAAAGGCAT TATCTCATCG GTTAAAACAT AGTTTTCCCG 001520 001521 ACTTAAAGTT TACAGCACAC TGGGGCGGAA GCGGGGGATA GTAAACCGCT TCTCTACTCC CTTTCTCCGT TTATTGACTC 001600 001601 ACACTCTGTT CTTTGGATCA CTTCCTTCGG AAAAAGTTCC TCGTAGTGTG TCTTGACTTT TTTAAAAGTT GTATGTTAAA 001680 001681 AGTAGTTAAA CACGCTGACA GATACTGAAG AATGAAGAAA ATTGTAAGAA TGTGAAGTCT GCCTTTAGAA TGCGGCAGGA 001760 001761 AACCTAAACA AAACTTAAAT GCTTTGTTTT GATCACATTA TCACAGTCGT TGGTCTTCAG AGGTCAATTG TGAACGGCTT 001840 001841 TGGCTTGTGT TTGCAGCTTT TCTTCAGTTG CCGCCTCCAC CCTTAGTTTA ATAACAATGA TCCAGTCCTG TTACACCTGA 001920 001921 GTGTGGACTC ATGCCATGAC TGACTTGCTT CTACCCTTTA GCTTTTCTAG TGCCATATTC TCCGCCTGCC ATATCTGATT 002000 002001 CTTTTCTTAA ATCCCATACT CTCTCATTCA GGAAACCTCT TCCCAACAAT TCCACAAAGA TCTAATTATT CTGCATATTC 002080 002081 TAGCACTACG TGATCAATAG TTCTCAATAG GTGTTTGCAC TTTTTTTTAA ATTGCTTTTT TCTCTAAGAA TTATTTTTCG 002160 002161 TTTGTTTTTG TCTGTTTACT TGATTTAAGG ACACTTCATT TTTGCTTCCC ATGTCTAGTA CACTGACACA GTGGACACTC 002240 002241 AATACTTGGT TTGTTGAAAG TTAAGTAGAC TATAAGTTCT ACTTAAAACC ACGTAGCTAT TTATTCGTAG CAAAAAACGT 002320 002321 ATTTGTGTTA AAAGTTTGCT GGCTAACTAT AAGTCGAGTA TTTTTCTAGC TATACAGACC TAGTCAAAGG ATGTGATTGT 002400 002401 TTGCTAACAT AATTGTCAAG TAATATATAT TATCTGTGTA ATGCTCATCT AAATATCATT GCTCTTTCTG ACCAGTCTGA 002480 002481 ACTTGTTGCC GGAGGGTTAA AAATCATGAC TACTTC |
Predicted Small Protein
Name | NONHSAT096285_smProtein_1778:1885 |
Length | 36 |
Molecular weight | 3978.7726 |
Aromaticity | 0.114285714286 |
Instability index | 61.8257142857 |
Isoelectric point | 7.78436279297 |
Runs | 8 |
Runs residual | 0.0474576271186 |
Runs probability | 0.0170574986752 |
Amino acid sequence | MLCFDHIITVVGLQRSIVNGFGLCLQLFFSCRLHP |
Secondary structure | LEELLEEEEEELLHHHHHHHHHHHHHHEEEEEELL |
PRMN | - |
PiMo | - |