NONHSAT096326
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT096326 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
670 nt |
Genomic location |
chr4-:49488943..49491571 |
Exon number |
3 |
Exons |
49488943..49489113,49490451..49490664,49491287..49491571 |
Genome context |
|
Sequence |
000001 CAATTTGATG ATCTTATGGC GGAGAAGGAA GCAGTATCTT CAAAATGTGT CAATTTGCCT AAAGAGAATC AAGTTTTTCA 000080
000081 ACAGGAGTTA TTATCTATGA AAAAAGTACA ACAGGAATGT GAAAAACTTG AGGAGGATAA AAATATGTTG GAAGAAGAAA 000160 000161 TATTAAATCT TAAGACACAT ATGGAAAACA GTATGGTAGA ACTTAGTAAA CTACAAGAAT ATAAATCAGA GCTAGATGAA 000240 000241 AGGGCAATGC TGGCAGTAGA AAAATTAGAA GAAATCCATT TACAGGAACA AGCACAATAT AAAAAACAAT TAGAGCAGTT 000320 000321 AAACAAGGAT ATAATACAGC TTCACTAAAT AAGAAGGAAC TCACACTTAA AGATGTGGAA CGTAAATTCT ACAAAATGAA 000400 000401 AACTGCTTAT GAAGACGTTA CAACTGAGTT AGAAGAATAT AAGGAAGCCT TTGCAGCAGC ATTGAAAGCT AACAGTTCCA 000480 000481 TGTCAAAAAA ATTAACTAAA TCGAATAAGA AAATAGCAAT GATCAGTATC AGCTCTTTAT GGAGAAAGAG CAGGTGAAAT 000560 000561 ATTTTCTCAG CACTCTTCCT ACAAGGCGAG GTCGAGAGTC ACCTTGTGTT GAAAATCTTA CTAGTATAGG ACTCAACAGA 000640 000641 AAATATATTC CCCAAATGCC CGTAAGAATT |
Predicted Small Protein
Name | NONHSAT096326_smProtein_395:556 |
Length | 54 |
Molecular weight | 6015.9316 |
Aromaticity | 0.0754716981132 |
Instability index | 43.5283018868 |
Isoelectric point | 9.75531005859 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0273046155399 |
Amino acid sequence | MKTAYEDVTTELEEYKEAFAAALKANSSMSKKLTKSNKKIAMISISSLWRKSR |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHEEEEHHHHHHHLL |
PRMN | - |
PiMo | - |