NONHSAT096326

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT096326

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

670 nt

Genomic location

chr4-:49488943..49491571

Exon number

3

Exons

49488943..49489113,49490451..49490664,49491287..49491571

Genome context

Sequence
000001 CAATTTGATG ATCTTATGGC GGAGAAGGAA GCAGTATCTT CAAAATGTGT CAATTTGCCT AAAGAGAATC AAGTTTTTCA 000080
000081 ACAGGAGTTA TTATCTATGA AAAAAGTACA ACAGGAATGT GAAAAACTTG AGGAGGATAA AAATATGTTG GAAGAAGAAA 000160
000161 TATTAAATCT TAAGACACAT ATGGAAAACA GTATGGTAGA ACTTAGTAAA CTACAAGAAT ATAAATCAGA GCTAGATGAA 000240
000241 AGGGCAATGC TGGCAGTAGA AAAATTAGAA GAAATCCATT TACAGGAACA AGCACAATAT AAAAAACAAT TAGAGCAGTT 000320
000321 AAACAAGGAT ATAATACAGC TTCACTAAAT AAGAAGGAAC TCACACTTAA AGATGTGGAA CGTAAATTCT ACAAAATGAA 000400
000401 AACTGCTTAT GAAGACGTTA CAACTGAGTT AGAAGAATAT AAGGAAGCCT TTGCAGCAGC ATTGAAAGCT AACAGTTCCA 000480
000481 TGTCAAAAAA ATTAACTAAA TCGAATAAGA AAATAGCAAT GATCAGTATC AGCTCTTTAT GGAGAAAGAG CAGGTGAAAT 000560
000561 ATTTTCTCAG CACTCTTCCT ACAAGGCGAG GTCGAGAGTC ACCTTGTGTT GAAAATCTTA CTAGTATAGG ACTCAACAGA 000640
000641 AAATATATTC CCCAAATGCC CGTAAGAATT
[back to top]

Predicted Small Protein

Name NONHSAT096326_smProtein_395:556
Length 54
Molecular weight 6015.9316
Aromaticity 0.0754716981132
Instability index 43.5283018868
Isoelectric point 9.75531005859
Runs 7
Runs residual 0.0281868384722
Runs probability 0.0273046155399
Amino acid sequence MKTAYEDVTTELEEYKEAFAAALKANSSMSKKLTKSNKKIAMISISSLWRKSR
Secondary structure LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHEEEEHHHHHHHLL
PRMN -
PiMo -