NONHSAT096479
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096479 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
582 nt |
Genomic location |
chr4+:56754976..56759807 |
Exon number |
5 |
Exons |
56754976..56755098,56756389..56756552,56757481..56757588,56758781..56758877,56759718..56759807 |
Genome context |
|
Sequence |
000001 CTCTTGTGCA TGGTTTGTGC AAATTGCAGT TTATTAACTT GTCTTTGTCT TTGATGCTTG CAACCTAATC CATCACAGCT 000080
000081 ACACTGCCTC GAAAAGAAAG TGCTGTCAAA CAGGAAACAG AGAGTCTTCA TGGAAGTTCG GGGAAATTAA CTGGATCTAC 000160 000161 TTCTAGTCTA AATAAGCTCA GTGTTCAGAG TTCAGGGAAT CGCAGATCTC AGTCATCTTC CCTGTTGGAT ATGGGAAACA 000240 000241 TGTCTGCCTC TGATCTCGAT GTTGCTGACA GGACCAAATT TGATAAGATC TTTGAACAGG TACTAAGTGA ACTGGAGCCC 000320 000321 CTATGTCTGG CAGAACAGGA CTTCATAAGT AAATTTTTCA AACTACAGCA ACATCAAAGT ATGCCTGGAA CTATGTGCCT 000400 000401 GAATAATTTT TGCAGGCTGA AGCAGAGGAC CTGGATGGAG GAACATTATC ACGGCAACAT AATTGTGGCA CACCACTGCC 000480 000481 TGTTTCATCT GAGAAAGATA TGATCCGCCA AATGATGATT AAAATATTTC GCTGCATTGA GCCAGAGCTG AACAACCTAA 000560 000561 TTGCATTAGG AGACAAAATT GA |
Predicted Small Protein
Name | NONHSAT096479_smProtein_230:502 |
Length | 91 |
Molecular weight | 10641.2367 |
Aromaticity | 0.1 |
Instability index | 51.0544444444 |
Isoelectric point | 6.56988525391 |
Runs | 10 |
Runs residual | 0.0287477954145 |
Runs probability | 0.0358858858859 |
Amino acid sequence | MGNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMCLNNF CRLKQRTWMEEHYHGNIIVAHHCLFHLRKI |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLHH HHHHHHHHHHHHHLLLEEEHHHHHHHHHLL |
PRMN | - |
PiMo | - |