NONHSAT096482
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096482 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
989 nt |
Genomic location |
chr4+:56794959..56795947 |
Exon number |
1 |
Exons |
56794959..56795947 |
Genome context |
|
Sequence |
000001 gagaaactag actgtttcta ctccagaggg gttagccaga taagggatgg gcttggagac catgtcaagt gagcaaaaat 000080
000081 ggaaggatct gggttatttg ttctgaagag ttatcacatg catgagacaa aaaattcatt ttcttttgat tgcttggaac 000160 000161 aaattgctca tacttatgga gaaacagatt ttagcttcat ataaagaaga ctttttccag caaagacgtt cagcaatgca 000240 000241 atgagctgct ttaacaagta gagcactctc ttttgtcatt ggacttgttt aggtggcagc tgggatggcc atctgttgga 000320 000321 gaggttgcag aggaagtctg tgttctatgt tggaggttgg tctaattgaa cttttaggac tctgataact ctATGTCTCC 000400 000401 ACAAAGTTTA ATTGATCTTT GTCTGAATAT TTCCATATTT GGTCATTGTC CTTCGGAGCT CCCTTTCTTG GCAgcctgct 000480 000481 atattcccag aattgtgtta acttcctgag ttcaagtcaa ggctctatga tttacttcgt gaTTTCTGGT AAATTACTTA 000560 000561 ATcccacctg taacattgtg aaaccaatac ttcctacttt taggcctctt atggagatta aatgaaatgg tacttgtaaa 000640 000641 acATGAATTG TGTAAAGCAG CACTCACTAG AACCCAGTAA TACACAATGG CTATGATTAG TTTATTAGTC TCTTAGCTTC 000720 000721 TTGTCTGTCT CCATCCTTCT TTCACTTGGC TACCTACTCA CCCTTCACat ctcacttagt tttcatttat atgcctctta 000800 000801 tttccagtga gtttgagtct cttcttatgg taaagagcca tttggcaaat tatattttca tacttgtgcc tactgttaaa 000880 000881 ttatttttct aatttattct actatttgtt agtcatttta ctgtcaattt ataggatctc tttctatatt aggtttacga 000960 000961 tattagTTGC AAATATTTTC CTGGCTTAT |
Predicted Small Protein
Name | NONHSAT096482_smProtein_392:508 |
Length | 39 |
Molecular weight | 4163.9419 |
Aromaticity | 0.0789473684211 |
Instability index | 98.0552631579 |
Isoelectric point | 5.30194091797 |
Runs | 7 |
Runs residual | 0.0115997229917 |
Runs probability | 0.0415878062936 |
Amino acid sequence | MSPQSLIDLCLNISIFGHCPSELPFLAACYIPRIVLTS |
Secondary structure | LLHHHHHHHHHLLLLLLLLLLLLHHHHHHLLLLEEELL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTTi |