NONHSAT096490
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096490 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1479 nt |
Genomic location |
chr4-:57095800..57112587 |
Exon number |
2 |
Exons |
57095800..57097193,57112518..57112587 |
Genome context |
|
Sequence |
000001 AAGGGGCTCA ACTGCCCGCC CTGTGACTGT GCATGCATCC CTCCCGACCC TGCAGTTACA GACACAGCAA GACAACCAAC 000080
000081 CATATTAAAT TCCCCATATA TATGGTGATC CAAGTCCATA GGCTACCTAC CTGAAGACAG CTATGATGTT CAGAGGCGAT 000160 000161 GACATTCTCC AATCGACAAG GAATTTAGTC AGTACTTGTT GAACAACTGA TACTGAATTC TATGTCACAA TACCTTGCAC 000240 000241 AAACTTATTT ATGTTGTTAT ATTTTGTTGT AGTTGTAGGC TCACAGAAAA TGAGAATTGA AAGAAATGCT GGAACCCATT 000320 000321 TAGTCCACTT GCTTGCAAAT ACTTTCAGCT CTGAAGACCT TTATTTGAAA TTTTATATGG AAACCTAATA TATACAAGAG 000400 000401 AGAGACTTGC AGCACTTTGA AGACCTTAGG AGCCTAAGCT CAGCCCTCTG TGACAGGTCC TAAGTGCCAA GAATTTTTCA 000480 000481 GAAACACTGC TCGAAAACCA TTGTTCAGGT TCAATCCCTT CATTTTCTAG AAAAAGAAGC TAAAGCAAGG CTATGAGGCA 000560 000561 AGTTAGCGCA GAACTAGACC TTCTGACTCA ATTTCATCTT TTCTAACACA TCACTACTTT TTGAGTAGGA ACAATGCCCT 000640 000641 GTGTCTCTTG TGTCCTCCAC CAGGGCCACC ACAGACAGAT AGCAGTGCTC AGTACATGTT GTTTAATAGA ACAATTGATA 000720 000721 TATACCTGCT TTTCAACTTG AAAAGGCCAA ATCACCACCC AAGATTCATT ATATGCAGAA AAAGCCTGCA TGCTTTTTAT 000800 000801 CAAAGGAGCT AAGGGTCACC TCAGTCACCA TACCTAACCT GCTTAGCTGT CACCAAGGAC ATACCCCAAA ACCAATAAGA 000880 000881 AGATTAAGAT GTCAAACAGT AAAGCAGCTG GGGCATGTAA TGGACTTAAA ACCACAAAGA GGAAGAAGAC CTATACTGAA 000960 000961 GAAAGTTCTT CCTGCCCAGG GCAATTAATG TGGTGAACAG ATGGGGAGAG ATATGAACTA TTTTCATGCT TTAATGGGAA 001040 001041 GATAAAAGAC ACAAGGAAAT AATAAGCAGA AAATCCATAG TGCAGGGGCA AACATAAAGA CATGCTTTTC TTTTTCCAAG 001120 001121 CAATATTTAA TTCTAAGCAG TAATATTTGC TCAAAGTTTT ACCCTGTTAG TTGTTTTTCC ATCATTAAGA AGGAACTGAG 001200 001201 TACTGGAGAG CTATAATAAG ACATTCAGAG ATAAATCACA GAGTTGTGCA GGGGTAGCAA TGGAAGCAAT GAAGATGAAA 001280 001281 ATGAGCTCCT GCATTCTGCT ATACACCTTA TCCCTGGCTG AGTTTGCAAA AAGGCAAGCT TCCCTTTATT CAGAAGGTAC 001360 001361 CATACAGTAC ATTTAGAAAG GATGTTTACA ATGATGATCA TGAGGTGGTA TTTGTAACAG CTAAGAAGCA TCAGGATATA 001440 001441 TGTTCAATAC AGTTTTATTG TGGAAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT096490_smProtein_1259:1375 |
Length | 39 |
Molecular weight | 4351.1566 |
Aromaticity | 0.105263157895 |
Instability index | 69.4368421053 |
Isoelectric point | 7.88385009766 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0 |
Amino acid sequence | MEAMKMKMSSCILLYTLSLAEFAKRQASLYSEGTIQYI |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEEL |
PRMN | - |
PiMo | - |