NONHSAT096493
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096493 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
862 nt |
Genomic location |
chr4+:57175095..57177787 |
Exon number |
4 |
Exons |
57175095..57175275,57176832..57176900,57177038..57177235,57177374..57177787 |
Genome context |
|
Sequence |
000001 gtctcagata tgggtattac agaggtgagc aagattctac aaggggcccc ccatctctgt agtttacacc ctaatgagag 000080
000081 ggtgtaacaa acaacaaaca agtcaaccag tatataaata gaatcatttc agatcaagaa aaatgctggc tgcacagaaa 000160 000161 ataaaacagg gtaatggaaa aTCCAGTGAT ACGCCAAGTT CTCTAAGTCC TCTGAATCTC CCTGGAGCTG GAAGTGAGAT 000240 000241 GGAAGAGAAG AATGCCACTA GTGACAGATG TTGGAGCATC TGTTTCCATG GCAAGGCAAC TGCTGGAACT GAACTCTGCT 000320 000321 CTGAAAACTA GCCATACTCC CAGCATGCCT GTGTTTGGGG TCCTAGAAGT TGGTAGCTTT CCTCAAAGGA TCATGTACTT 000400 000401 CAAGATCCTG TTAATTGATT GAAAAAGGCA TTCCAGAATA TCCAGTCTGA GTGTAAGAAC CCTGTGGACT CTTCTCCCCG 000480 000481 GGCACCTCTT CTGTAGGAGC CGATCTGCCC CATTGAGGAC CTTTCATCTG CACAAGGGGC CAGGCATTCT CCCAAGGCCT 000560 000561 GGCAGACAGT ATAGGAAGCA GGATCTGCTC CTGAAGAAGG GGATGGCTCA AGACAGTGCT GCCGCCCAGA CAATGAGGAA 000640 000641 GCCAGCTGGG ATAGCTAGAA ACAAAGCACA GCACTTAAAT CTCAGCATCA AGTGCTTATC TATGTCTTCA ATCTGTCACA 000720 000721 TTTGGCTCCG ACTCCTTTTT CTCATGCATC TATTAGGGGA TGGAAACAAA TGTTTCATTC AGCAATAGCT TAGAATCTCA 000800 000801 TGCCCATTAT AAAGATAACC ATAAATAAAT GAAAGCTAGA AGGCCAAAAC TTGATTTTTC TG |
Predicted Small Protein
Name | NONHSAT096493_smProtein_602:787 |
Length | 62 |
Molecular weight | 6825.0895 |
Aromaticity | 0.0491803278689 |
Instability index | 68.2639344262 |
Isoelectric point | 9.74957275391 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0436318671613 |
Amino acid sequence | MAQDSAAAQTMRKPAGIARNKAQHLNLSIKCLSMSSICHIWLRLLFLMHLLGDGNKCFIQ Q |
Secondary structure | LLHHHHHHHHHLLHHHHHHHHHHHHLLHHHHHLHHHHHHHHHHHHHHHHHLLLLLEEEEL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL L |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooo o |