NONHSAT096613
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096613 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
640 nt |
Genomic location |
chr4+:62453086..62543110 |
Exon number |
2 |
Exons |
62453086..62453158,62542544..62543110 |
Genome context |
|
Sequence |
000001 GTGACTCTGA CCCTGCTCAG ATGGAGAATA TCCGATGTTA TCTGCCAGAT GCCTATAAGA TTATGTCTCA AAGATGCAAT 000080
000081 AACAGAACCC AGTGTGCAGT GGTGGCAGGT CCTGATGTTT TTCCAGACCC GTGTCCAGGA ACCTATAAAT ACCTTGAAGT 000160 000161 GCAGTATGAA TGTGTCCCTT ACAGTATGTA TATTCCTATA CTTTTCTTGG CAAGAGAAAA GATACTAAAC TGTGTTTTGC 000240 000241 ATGCATTGAC AAATATTCTC TATGAAAACA TAAATCACGT AAATTAAATG AAAAAATTGG CTAATATTAA TTTTTGAGAA 000320 000321 TCATAGACCC TCCCTGCCAT CAGAAGAATT AGATATTGCC TACCCTCTCC TACGGCATTT ACTTGTGATT ATTTCTGTAT 000400 000401 ATGAATACGT GTTCTAACAC ACTTTTCTTA ATTAATGCAA GAATATAAAA CATTTAGAAA AAGGTTGGGG GAGTGTTATA 000480 000481 CCAATTCTCC AGGTCCAAGC AGATAAGAGG TGAAAATGAG CAATACAATT TTATATGTAA TGTATAGCAG TTGATACATT 000560 000561 TTGAATTTGA TAGAATTGTA TCTAAGCTTC ATCTGCTGTC AACATTTTGA GAATTAGAAA TATATTCATC CAGAAGGAGT 000640 |
Predicted Small Protein
Name | NONHSAT096613_smProtein_20:286 |
Length | 89 |
Molecular weight | 10219.8186 |
Aromaticity | 0.113636363636 |
Instability index | 40.3704545455 |
Isoelectric point | 6.03033447266 |
Runs | 10 |
Runs residual | 0.0177272727273 |
Runs probability | 0.0486309839252 |
Amino acid sequence | MENIRCYLPDAYKIMSQRCNNRTQCAVVAGPDVFPDPCPGTYKYLEVQYECVPYSMYIPI LFLAREKILNCVLHALTNILYENINHVN |
Secondary structure | LLLLLLLLHHHHHHHHHHLLLLLEEEEEELLLLLLLLLLLLEEEEEEEEEEELLEEEEHH HHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |