NONHSAT096660
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096660 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1603 nt |
Genomic location |
chr4-:66008421..66011481 |
Exon number |
5 |
Exons |
66008421..66009229,66010450..66010467,66010533..66011075,66011170..66011235,66011315..66011481 |
Genome context |
|
Sequence |
000001 ATGGTGTTAA ATAATTTGAA CACCATGAAT AAGATGGTTA ATTCCACAAG AACACTGCCA ACATCAGAAA AATCTGCCTT 000080
000081 TTGGCCCAGG CTGACCATGG AAAAGGTATC CTAAATGACT TTCTTATACC TAGTAATGAA ATCatcccaa gttgcctggc 000160 000161 aagcaagTTA AGGTACGTGG ATATAAGATT CAAGGGATCA CTATGAAATG TACTTGTTTC ACTACATTAT GCACTAAGTC 000240 000241 ACTTGATAAA CCCTCTAGAA CATGTAGATT TTGTCTTGGA AGTATAAACT GATGTTTGCA TTTTTGATAG ATGTATCATT 000320 000321 TTGGTAGATG TGATGGAATA AGTCTATCCA CAGATACAAG CATTGCTGTG AGAAGTCTGG GTCAAAAACA TCCACCTACT 000400 000401 TTTAATGATA GTAAGAGAAA GTGATAGTTT CACTTTAATA ATGAAACTTA AATTTACTCC ACAAGATGCC TGTTCTCTCC 000480 000481 TCAAGCATAT TTTAGAACAT ATTAAGATAC ACATGCAGAC TGATTTTACT CATAAATTCC TAGAATAAAG AGCAGAGAGG 000560 000561 GAGACTAAGT TACAGGTGGA TTCTAATTCT AAAGGAGAGC AACTGTCGGA CTGGAGCAAT GGCTTTTAGG ACATCAATGA 000640 000641 TTCTTATTTT TACTTCTCTA CAGATAGAAA ATGTGTTTGC CAGTTCAATA GGTGGGTATA ACATTAGAAT TGACCACTTT 000720 000721 CACAAAATCT ATAGTCAAAA AAAAAAAAAG TCAAAAAGGG AGTTCTTTTG AAAACCctgc atggaattta ttttATGAAG 000800 000801 TTTAAGAAAA TTATGAAGCT TTATTAGGCA AAAGGAAAGA AACCTGTGTT TGTTGAGTTG ATTCTGAAAA ATATATAAAG 000880 000881 TTTACATGAT GCTATCTTGA AAAAGAATAA AGGATAAAAT CTATAAATTA GTTTTTTAGA ATTAAAAATA GGAGCTTTGA 000960 000961 AGACATGTCA TTCAGATTCT AAAGTTCAGA TGAGTGCAAT TTGCAGTTAG TAGTCACCCA CATCCCAAGC TCTTCTTGCT 001040 001041 ATAATGTGTT AGAAACTTCA TAGCTCTATC GATATTACAG CTGATACAGT AGAAAAAATG GTGTAAATAT TGCAAACCTT 001120 001121 TGTTCCTCTT AGACACTGAA AGCCACTTTT ATAAAATTTA ATAGTGGAGA CACTCCTCCA GTTATAATAT TCATTTCTAA 001200 001201 AATATTTGCT GTGATATTGA GGCTAGTGTT CTCTTATTCT TATGGTTCCA GAATAAGCCA TAATATTTCA CTCAAGAACA 001280 001281 AATTTCTCAG AAACATGAGG ATGTGAGACA AAGGCAAACA CAGAAGCTGG CAGAAGCTCA GAGGTAGATA TATTTGGAGC 001360 001361 TCCCCTCAAA TGGTACTGCC CTTAAAACAA ATCCAAAGGG AGACGAATCA AGATATGATT CACAACAGAT GAAGATTATG 001440 001441 ATCCCTAAAC CTGTACCTTA GGCAGAAAAT GAGCATATGT TTATTGCATG TGTCTTGAAA AGGAatacat atatatatat 001520 001521 atatatatCT TATACTTCAA GGAATATATG TATATTCCAA GCACATTCCT GCTGAGTTTT TGCAATACAT ACCATCACAA 001600 001601 TTT |
Predicted Small Protein
Name | NONHSAT096660_smProtein_404:547 |
Length | 48 |
Molecular weight | 5615.6136 |
Aromaticity | 0.0851063829787 |
Instability index | 50.3361702128 |
Isoelectric point | 6.89776611328 |
Runs | 10 |
Runs residual | 0.0464893617021 |
Runs probability | 0.0154742978273 |
Amino acid sequence | MIVRESDSFTLIMKLKFTPQDACSLLKHILEHIKIHMQTDFTHKFLE |
Secondary structure | LEEELLLLLEEEHHHLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHLL |
PRMN | - |
PiMo | - |