NONHSAT096780
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096780 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
739 nt |
Genomic location |
chr4+:70894176..70897125 |
Exon number |
2 |
Exons |
70894176..70894233,70896445..70897125 |
Genome context |
|
Sequence |
000001 ATCTCTTGAG ACTTCACTTC AGCTTCACTG ACTTCTGGAT TCTCCTCTTG AGTAAAAGGA CTCAGCCAAC TATGAAGTTT 000080
000081 TTTGTTTTTG CTTTAATCTT GGCTCTCATG CTTTCCATGA CTGTAAGTAT ATCTGGAAGT TTTAAAGGAT ACATTCTCAG 000160 000161 TACTTATCCC AAGGATCTTT CTTATTCCTT ACGTTCTGCC ATATATTCAT GTTCACCTCA ATACAGCTTT AATATTTCTA 000240 000241 TGTAAAGATT TTCCTTGAAT TAACCTATAT AAGTTCTTAA AGGACTTAGA ATAAATATTC ATTACATACC TGCGAACACT 000320 000321 CAAGTACAAT TACTTGAATA TAAAAATAAA AGAAAATTAA GCAAGCTTCA TAAATATGTG GGACTGAGAA CTGTGAAAAT 000400 000401 ATCTTTAAAT ATTAAAAGCT CTAGACCACC TGAAGTTAGA AATCTGAGGA AAGAACAAGG TACACTTCAA TGGAACCTAA 000480 000481 GTATTAGAGG GTGTCAAAAT ATGAATTTTC AAGTAATTTC TTGCACAACC AAACTGTTCA AGTTAGCATA CAATTTATTT 000560 000561 TACTCTTTCT AAAATAAAGC TGCCTATTTT AAGCCATAAA ACAAATCTAT ATCTGTTAAG TGTCAtgagt tcccagcttg 000640 000641 tatcgtcatt tactactgtg taatagtaga aaaggcactt gacctctctg gagctctttc tccttctctA CTTTCTCATC 000720 000721 CTCTTCCCAC TCCTCCTCT |
Predicted Small Protein
Name | NONHSAT096780_smProtein_71:244 |
Length | 58 |
Molecular weight | 6420.5543 |
Aromaticity | 0.175438596491 |
Instability index | 46.9070175439 |
Isoelectric point | 9.30194091797 |
Runs | 11 |
Runs residual | 0.0390350877193 |
Runs probability | 0.051950346068 |
Amino acid sequence | MKFFVFALILALMLSMTVSISGSFKGYILSTYPKDLSYSLRSAIYSCSPQYSFNISM |
Secondary structure | LHHHHHHHHHHHHHHLEEEEELLLLEEEEEELLLLLLHHHHHHHHHLLLLEEEEELL |
PRMN | LLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | i???????????????????????????????????????????????????????? |