NONHSAT096874

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT096874

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

575 nt

Genomic location

chr4+:74794883..74799108

Exon number

3

Exons

74794883..74794976,74797918..74798036,74798747..74799108

Genome context

Sequence
000001 TGCAAATCAA AACCACAATG AGATACTTTC TCACACCATC AGAATGATTA TTCTTGAAAA GTCAAAAAAT AACAGATGCT 000080
000081 GGTGATGTTG TGGATTGTTG TCTCTGGCAG CCATGAAGGC ACTTCACTCA GATTTTCCTC CGACAAGACC TGCTGCAGGA 000160
000161 GCTCAGCTGA TGGCCCACAG TGGCAGGGCA GCTAGCTTAC TAGTGCACTT TTACTGTGTG CACTACCACA CTTTCTACCA 000240
000241 TTGACTATGA ATAATGTCTG TTTTAAAGTA TGATAAAACT TTTTCCAGCA ATAAACAAAT CAGAAAACAT TTGTTACTAT 000320
000321 GTACAAGGTT CTGTGTTAGG TTTAGTAATC TACATGTGCA TCTCCCAAGC TGTCCCCATA GAATGTTTAT TATATATTAT 000400
000401 TTAGCATTCT ATCTCTAACA CTCTTTTTAG GCAGTTTTTG CTTGTTTGGC CTTCAGAGTC TCATTAAGAT ATCATTTATA 000480
000481 ATTAGGTGGG GAAAGCATAC ATTGTCCAAA TCAAAAGGAA AGTATTCTGT GTTCCTGTTT AAGTGCCCAT TTAAATTGAT 000560
000561 GCTGAAGTTT TCAAC
[back to top]

Predicted Small Protein

Name NONHSAT096874_smProtein_269:403
Length 45
Molecular weight 4968.0323
Aromaticity 0.113636363636
Instability index 80.3090909091
Isoelectric point 5.88934326172
Runs 8
Runs residual 0.0187165775401
Runs probability 0.0293565624448
Amino acid sequence MIKLFPAINKSENICYYVQGSVLGLVIYMCISQAVPIECLLYII
Secondary structure LLEEELLLLLLLLEEEHHHHHHHHHHHHLLLLLLLLHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLL
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToooo