NONHSAT097113
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097113 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2067 nt |
Genomic location |
chr4+:80413570..80497614 |
Exon number |
4 |
Exons |
80413570..80413777,80414306..80414739,80434939..80435056,80496295..80497614 |
Genome context |
|
Sequence |
000001 GGAAATTATT ACAAAGTTCA GCTGGAAGTC TCCTTCTCCC TGTGGACCTT CCCCAATTCC ACTGGCTGCC CTCCTCAAGG 000080
000081 ACCCCTGTGA GATAAATTCA GAAATGGCTA TCCTTGGCTT CCCTGGGGAA CAAGAGTGCC TGCAGTTCTT TTCCCACTTC 000160 000161 TTTTACTTTT CTATTTCACT GGGCTCTCTA AATTCATTTC AGCTCTAGGG ATTTGGAAAG GATTCCGTGA TGGTTAATAT 000240 000241 TGAGTGTCAA CTTGATTGGA TTGAAGGATG CAAAGTATTG TTCCTGGGTG TGTCTGTGAG GGTGTCACCA AAGGAGATGA 000320 000321 ACATTTGAAT CAGTGAGCTG GGAGACACAA ACCCATACTC AATCTTGGGG GACACCATCT AATCAGCTGC CAGTGCAACT 000400 000401 AGGATAAAAT CAGGCAGAGA AATTTGGAAA GACTAGACTG GCTGAGTCTT CTGGCCTTCA TCTTTCTCCC ATGCTAGATG 000480 000481 CTTCCTGACC TCGAATATCA GACTCCAAGT TCTTTAGCTT TTGGACTCTT GGACCTTTGG CCACAGACGG AAGGCTGCAC 000560 000561 TTTTGAAGTT TTGGGACTTG GACTGGCTTC CTTGCTCCTC AGCTTACAGA TGGCCTATTG TGGGACTTCA CCTTGTGATT 000640 000641 GTGATTTCAA ACCTTCTGGG TTTCTTCCCA GCGCTAAATC CTGTCGACTG GATTCACTAG GATGAATAGA GAAAGAAGTG 000720 000721 TTACATTTTA AGATAATTTC TTTTCTAAAC ACACAGAAAG TTTTGAAACC AATGGAGAGA TCAACACAAG CTTTGGAGAG 000800 000801 GAGATCAAAA TATCTGCTTC ACTGGAAGGA GTTTTGGATT GCTCAACAAG GTTCAGATCT GTGGCATAAT CAGGCTTCCT 000880 000881 AATCCTGAAC CAAAGTTGTT GTTGTATCTC GTAGTTGTCA CCTGAGAGCT GACTGACCTG TTTCAAGCAT ATGTGAGATG 000960 000961 CCTTCTGGAA ATGCCCGGAA GCATATAGCT AATGGGATGA GGCATTTCAA GGTTGAACTT CAGCAAGAGC AAGTGGGATA 001040 001041 AAGGGCAAAA AGCAGCACAT TCCTTTCAAA ATGTCCCCAT TTTAAACTGC AGGCTAGAGT AGACAATGGA AATATATGAC 001120 001121 ATATAAAGAA ACTGGTGAGA TTATTAAGCA GAGGGCCTTC TGGGGAGCAT TAAAGAGTGA GCAAGAAAAA TTTCTCAGAC 001200 001201 ATGGTGATTC TAGAATTGAA AAATCATAGA CTCTTTCTCT TCTCTCTCCT TTGAGAGTTT CCAGATGAAT TCTTGGATCT 001280 001281 GGCTACTGAG CAAATATATG AATAATAACC TAGGATCAGC TGGGTATAAG AGGTTTCCAC CAGAAGTCCA TGAAAACCAA 001360 001361 TGTTTTTAAG CATCTATTGG GCAACTACCA TAAACAATCA GCAAGATGTT TAAACAGTTG ATTCTGCCGG CGGCCCAACC 001440 001441 AGTTTTTAAC TGTATCACGA AAACTGGCCT GGGGGTACAG TCTGAGATTA TTCCAGCCCT GCTTTTACAC CGCCAGAAAT 001520 001521 TCCCTTTCTG TTACAAATTT CTACCCCAGA GAGGTTTGCA TATTCTTGGC ATTTTCACTG TGCATCAGTG AATCAGCTAG 001600 001601 CCTACGGGCC AAGGAGAGGG GAAAAAAATC CCAAATAAAA CTCAACCCAG TTAGGATGTC TTCATCTATT TTTCAGTGGG 001680 001681 AAAAAATACA GCTGGACTCA GTGACTTCAG TCAAAAGCAA ACATTACTAG TTGCTTCATT TTTCTAATTT TTATTTTTGA 001760 001761 CTCTCAAGTT TTGGAGGGCA TAATAAAGAC ATAGCCTCAG CAAAGTCACT TAGAAGATTG AGTTCGTTAT TTTGCAAAGC 001840 001841 TTGGGTAGTG ACACTTCTGC AAAATGCACA AGCACATGAG CAGAGAGATG TGTGAATTCA GGAAAGCAGC CAAATGCACA 001920 001921 TCAGAGCTGA GGAATGTCAC AGCGAAATGA AGAAAACTTG TAAACACCTA TCTGTATTTT TAGGTAGAGA ATGTTCTAAC 002000 002001 ATATTGCCAA TGGGTGCTGC CTGTGTGTTC CTTCCCCTAA GCTTTAAACT CAACTGATAT TAAAGGT |
Predicted Small Protein
Name | NONHSAT097113_smProtein_1913:2056 |
Length | 48 |
Molecular weight | 5321.3386 |
Aromaticity | 0.063829787234 |
Instability index | 88.9638297872 |
Isoelectric point | 8.47808837891 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.00957820565663 |
Amino acid sequence | MHIRAEECHSEMKKTCKHLSVFLGRECSNILPMGAACVFLPLSFKLN |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHLLHHHLLLLLLLLEEELLLEEELL |
PRMN | - |
PiMo | - |