NONHSAT097154
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097154 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
823 nt |
Genomic location |
chr4-:82654539..82655361 |
Exon number |
1 |
Exons |
82654539..82655361 |
Genome context |
|
Sequence |
000001 GAGCACCCAA GAGCTTCTGA AGTCATCAGG ATGCTGACCC TGTATGGAGA CCATAGCATG GCAAGTAAGT GGGGCACTTT 000080
000081 ACTTAGCATA CTCCTCCACT TCAGTCAGAC TGGTCTATGC ACTGCCCTGG GGGCAGACCA TGCTCTTTCT GCCCTCTGAG 000160 000161 TCTTTGCCTC AGTCACACAC ATCTGCCAAG ATATAAACTA TGGCTAAATC ATTTGGTATC TACATGCCAA CGAGGCTTCA 000240 000241 ATATCCTCTG TCTGCCTATA TTTACATGTA GAATGAGTCC TATATTATGG ATCCTACGCC TTCCTAGAAA CTTGAAACAT 000320 000321 TGATAACATT CTAATAGCAA CGGTGGTCAT AGGTTATGTA ATAGCAACAG CGTTCATAGG TTATGTCCTT CCATGGGGTC 000400 000401 AAATATCTTC CTGGGAAACA GTAATTACAA ACCTGCTATC AGCTATTCTG TACATTGGAA CAGACCTAGT ACAATGGATC 000480 000481 TGAGGTGGCT TTTCAGTTGA CAAAGCCACC CTTACAGGAT TCTTTCTTTT CCATTTTATT CTATCTTTCA TTATTACAGC 000560 000561 CCTACTAGCT GTTCACCCCC TACTCCTACA TGAAACAGGT TCCAACAACC CTTTGGAAAT TTCATTAGAC TCTGATAAAA 000640 000641 TCCCATTACA CCCTTATTGC ATGATTAAAG ATATTTTAGG CCTAGTCCTA CTTGTCCTGC TCCTCCTAAT ACTAGTGTAT 000720 000721 TCTCACCTGA CCTGCTAGGA GACCCAGACA ACTACATCCC AGCAACCCTC TCAACACTCC ACCCCATATT AAGCCAGAAT 000800 000801 AATACTCCTT ATTTGCCTAT TCA |
Predicted Small Protein
Name | NONHSAT097154_smProtein_116:322 |
Length | 69 |
Molecular weight | 7941.583 |
Aromaticity | 0.0882352941176 |
Instability index | 73.6602941176 |
Isoelectric point | 9.73565673828 |
Runs | 7 |
Runs residual | 0.037559618442 |
Runs probability | 0.0810432281019 |
Amino acid sequence | MHCPGGRPCSFCPLSLCLSHTHLPRYKLWLNHLVSTCQRGFNILCLPIFTCRMSPILWIL RLPRNLKH |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLLEEEELLLLLLLLLHHHHHH HLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL LLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii iiiiiiii |