NONHSAT097185

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT097185

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2308 nt

Genomic location

chr4-:83814605..83822069

Exon number

6

Exons

83814605..83816000,83816845..83816927,83819142..83819215,83820866..83820890,83821230..83821376,83821487..83822069

Genome context

Sequence
000001 AGTTCGAAGG CTTCGAGGCT GCTCCCATAC GCACTGGTGG AAGGAGAGGC CGCGCTCCCG GCTGAGCACG GTGTCACGGG 000080
000081 TGCTGCAGCC CACTGCGGAG CAACTTCGGG TCATCTTCTT GTTACGTGGG GCCCCACCTT CGGGGTTCCC GCGACAGCAT 000160
000161 GAATCACGAC CACTTTAGCT CCGCCCGTTG ACTCTGCGGC TACGACCTTT ATTTGTCACG AAAGGCGGGC TTTAGAGGCG 000240
000241 CGGGACTTCC ACACTTCCTC TCCGAAGGCC CTGCGCCGGT GCCGTAGCCA ATGACAGGCC ACGTTGTGTC CCAGCAGCCA 000320
000321 ATCGGAAGGG CCTGAGCCTG AAGACGTGCA TTTGACCGCT CCTCCCTCCG CGTTGGAGGC GGAATAGTGG GTTTTGCTGC 000400
000401 AACCGGTTTA TTTTCCTTCT GTTTTCACCC ATTCTGGCAC AATCTGGCGC CATCGTCCTT CTTGTGAGGC CAAGCCTGAA 000480
000481 AATGCGAAGC AGAGAGGCAG GACCAAAATT GAGGCGAATC CAGGAACCTG CCAATGGGTC TCCGGGTGCG GTCTCTGAAA 000560
000561 CTGGAGGATA TCGGGAGGAA AGGCTCTCCG ATGCGGAGAT AATGGGGAAG CTCTTGGCAT GGTTGGCTGT AGGTATGTGA 000640
000641 TACCGGAGGA GCAGGAGTCA AATAGGATAC GCCGACTTTT AATTCAAGGA ACCCTTTTCT GAAACACTTT GCCACAATGA 000720
000721 AGGAAATAAG ATTACAGCCG AAGATACATA TTAAGGAATT GTACTCTCAG AGATGTTGAG AAAAGATACA TGGGTCTTGG 000800
000801 AAGATAATTA CTCAAAATAT GCAGGGAAGG AATAAAATTG AAGGGTGTTT TTCTTAGAGA ACATCATTTG TCATATTTAT 000880
000881 TTGATCAAGA AGTTGAAGAT TTATATAATA AGGATCTAGT TTGAAGCACT AAGAAGAATA AGACATCAGT TTGAAAAGAG 000960
000961 GCTCTATCAG AACAACACGA ATTCTGCTAA AATTGAAGCA AGAACAAACA TCAAATATAT GTTGACACTT GGGTGGAAGA 001040
001041 ATGGTGAACT AATTGATGCT TTATGAAAAG TTGATAGGGA CAGTGCTCCA AAGAAATCAG TTTACAAATG GATAACTCGT 001120
001121 TTTAAGAAGG CATAAGGTAA TGTTGAAGAA GAAGCCCACA GTGGCAGATC ATCCACATCA GTTTGTGAGA AAAAAGTTAG 001200
001201 TTCATGGCGT AATTGAAGAA AACCAACAAT TAACAGCAGA AACAACAGCC AACACCATAG ACATCTCAGT TGGTTCACCT 001280
001281 TACACAATTT TGACTGGAAA AGTTCAGCAA ACTTTATACC TGATAGGTAC CAAAACCATT GCACCCAGAT CAGCTACAGA 001360
001361 CAAGAATAGA GCTTTCAATG GAAATTTTAA ATAAGTGGGA TCAGGATCTT GAAGCCTTTC ATTGAAAAAT TGTAACAGGA 001440
001441 GATGAAACAT GGCTTTACCA GCGCAATCCT GAAGACAAAA CACAAAGCAG TGGTTACCAA GATAAGTAGT TCAGTTAAAG 001520
001521 CACAAGAGGA CTGGTTGAGA GCAAAGGTCA TGGCAACAGC TTTTGAATGC TCAAGGCATT TTGCTTGTTG ACTTTCTGTA 001600
001601 GGGCCAAAGA ATGGTAACGT GCTTATCATG GGAGTGTTTT GAGAAACTTA GCCAAAGCTT CAGCAGAAAA ATCCCCGAGA 001680
001681 AAGACCAGAG AGTTCTTCAC CACAACAATG TTCCTGCTCA TCCCTCTCAT CAAACAAGGC CATTTTGCAA GAGTTTTGAT 001760
001761 GGGAAATCAC TAGGCATCCA CCCTACAGTC CTGGTTTGGC ACCTTCTGAC TTTTTGTTTC CTAATCTTAA AAAAATTTTT 001840
001841 CAGGGCAGTA CATTTTTCTC AAGTTAATGT ATAAAGAAAC TGCATTGATG TAGATAAATT CCCAGAACTC TCAGTTCTTT 001920
001921 AGGGATGGAC TAAATAGCTG GTATCATCAC TTACAAAAGT GTCTTGAATG CTATAGAGCT AATGTTCAAA AATATAGTTT 002000
002001 ATATTTTTTA TCTTTTAACC ATTTTTCCAC AAACTTTTTG AAGTCTCCTT GAATATGTAC CATTTATAAA GGGGAAAAAT 002080
002081 TCTGTGACTA CTCATGTTGA CTTAATGCTG ACTTAATTTT CTGTTTTGTA AATATATACA AACAAGTTGA TACAAATTTT 002160
002161 GTTTATAGCC CTTAAACAAA TTTGTGAAAT AAATGCATTC AGAAACAAAC TAAAACAATG AAATGGATGC TACTGTTTTA 002240
002241 CTGAGGTGTA AGCATAGTAC TGGCTGCTAT GGAAAAAGTT ACATAAACAT TCATGTATCT TGTGATGA
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Predicted Small Protein

Name NONHSAT097185_smProtein_1610:1873
Length 88
Molecular weight 10206.8399
Aromaticity 0.126436781609
Instability index 43.9379310345
Isoelectric point 9.55780029297
Runs 12
Runs residual 0.000328407224959
Runs probability 0.0122328210563
Amino acid sequence MVTCLSWECFEKLSQSFSRKIPEKDQRVLHHNNVPAHPSHQTRPFCKSFDGKSLGIHPTV
LVWHLLTFCFLILKKFFRAVHFSQVNV
Secondary structure LEEELLHHHHHHHHLHHHLLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLHH
HHHHHHHHHHHHHHHHHHHHHHEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLH
HHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiT
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